| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3808 |
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| Symbol | tbpA |
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| ID | 8532234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 4204948 |
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| End bp | 4205964 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | thiamine transporter substrate binding subunit |
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| Protein accession | YP_003261149 |
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| Protein GI | 261823043 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAAATC AATTATTACA CCGTTCAGCC ATCGTGCTGA AAACCAGCCT GCCTTGTCTG
TTACTGCTCT CAGCATCCAC TTTCGCCAAG CCCGCGCTTA CCGTTTATAC CTATGATTCA
TTCGCTTCAG AGTGGGGGCC AGGACCGGTC ATCAAGACCG CGTTTGAAAA AGAGTGCGAG
TGCGAGCTGA ATTTCGTCGC GCTGGAGGAT GGCGCATCGC TGCTGAACCG TCTGCGTATG
GAAGGAAAAA ACAGCAAAGC GGATATCATT CTGGGGCTGG ACAACAACCT GTTGCAGGCT
GCGGAGCAAA CCGGCCTATT TACACCACAC GGTCAGGACA CCAGCACTGT TACGGTGCCA
GGGGGGTGGA GCAATAAAAC GTTCGTTCCT TACGACTATG GCTATTTCGC GTTTGTATAT
AACAAAAACA CGCTGAAGAA CCCGCCGAAA AGCCTGCATG AACTGCTGGA CAGCAACGCA
CCGTGGAAAG TGATCTATCA GGACCCGCGC ACCAGCACGC CGGGACTAGG TCTGCTACTG
TGGATGCAGA AAGTGTACGG CGACGACGCG CCGCAAGCCT GGCAGAAGCT GGCGAAAAAA
ACCGTTACCG TGACCAAAGG CTGGAGCGAA GCCTACGGCC TGTTCCTTAA AGGGGAAGCG
GATCTGGTGC TGAGCTATAC CACATCACCG GCCTACCACA TCATCGAAGA GAAGAAAGAC
AACTACGCAG CGGCCACTTT CAGCGAAGGA CACTACCTGC AAATCGAAAT CGCCGGGCAG
TTGGCTTCCA GCAAAAATCC CGAGCTGGCA AAACGCTTTA TGAAGTTCAT CCTGAGCCCG
ACTTTCCAGC AGGCTATCCC TACTACCAAC TGGATGTATC CGGCGGTGAC AACTGAACTG
CCTGCGGGCT TCGCGACGCT TGCCGTACCT GAGAAAGCGA TGCAGTTCAG CGCACAAGAA
GTCGCCGACC AAAGGACGCA GTGGATTCAG GCATGGCAAC GCGCCGTCAG CCACTGA
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| Protein sequence | MLNQLLHRSA IVLKTSLPCL LLLSASTFAK PALTVYTYDS FASEWGPGPV IKTAFEKECE
CELNFVALED GASLLNRLRM EGKNSKADII LGLDNNLLQA AEQTGLFTPH GQDTSTVTVP
GGWSNKTFVP YDYGYFAFVY NKNTLKNPPK SLHELLDSNA PWKVIYQDPR TSTPGLGLLL
WMQKVYGDDA PQAWQKLAKK TVTVTKGWSE AYGLFLKGEA DLVLSYTTSP AYHIIEEKKD
NYAAATFSEG HYLQIEIAGQ LASSKNPELA KRFMKFILSP TFQQAIPTTN WMYPAVTTEL
PAGFATLAVP EKAMQFSAQE VADQRTQWIQ AWQRAVSH
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