Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3738 |
Symbol | |
ID | 8532164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4122773 |
End bp | 4125370 |
Gene Length | 2598 bp |
Protein Length | 865 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
Protein accession | YP_003261080 |
Protein GI | 261822974 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.145959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCTAGAAG AATATCGTAA GCACGTAGCC GAGCGGGCTG CGCAGGGAAT TGTTCCTAAA CCGTTAGATG CCACGCAGAT GGCCGCGCTG GTTGAGTCAC TCAAGAATCC CTCGGCAGGC GAAGAAGAAG TATTGCTTGA TCTGCTGATT AACCGTGTTC CCCCCGGTGT TGATGAAGCC GCCTATGTAA AGGCCGGTTT TTTGGCTGCC GTCGCTAAAG GCGAAGCGGC TTCCCCCTTG GTTACTCAGG AAAAAGCGAT TGAGCTGCTG GGCACCATGC AAGGTGGTTA TAATATTCAT CCGCTGATTG ACGCGTTGGA TAGCGACAAG CTGGCACCGA TTGCCGCGAA AGCGCTGTCT CACACGCTGC TGATGTTTGA TAACTTCTAT GATGTGGAAG AAAAGGCGAA AGCAGGCAAT GCGCACGCCA AGAACGTGAT TCAATCCTGG GCTGATGCCG AGTGGTTCCT GTCCCGCCCG AAACTGGCGG AAAAAATTAC CGTTACCGTC TTTAAAGTTA CCGGTGAAAC GAACACGGAT GACCTGTCTC CGGCACCTGA TGCCTGGTCA CGCCCTGATA TTCCACTGCA CGCGCTGGCG ATGCTGAAAA ATGCCCGTGA AGGCATCGAT CCCGATCAGC CTGGTAACGT AGGGCCGATC AAACAGATCG AAGAACTGAA CAAGAAAGGC TTCCCGCTGG CGTATGTCGG TGACGTTGTC GGTACAGGAT CGTCGCGTAA GTCGGCAACC AACTCCGTGC TGTGGTTCAT GGGTGAAGAC ATTCCTCATG TTCCGAACAA ACGCGGTGGT GGCGTGGTGC TGGGCGGCAA GATCGCCCCA ATCTTCTTCA ACACCATGGA AGATGCCGGT GCTCTGCCGA TCGAAGTCGA CGTTAACGAT CTGAACATGG GCGATGTGAT CGACATCTAT CCATACGAAG GCGAAGTACG CCGTCATGAC ACCAATGAAG TGCTGGCGAC ATTTGCCCTG AAAACCGATG TATTGCTGGA CGAAGTGCGC GCGGGTGGCC GTATTCCGCT GATCATCGGC CGTGGGCTGA CGTCTAAAGC GCGTGAGTCA CTGGGCTTGC CGCACAGCGA TGTTTTCCGT ATTTCCAAAG CGGTTGAAGC CAGCAAAAAA GGCTTCTCGC TGGCGCAGAA AATGGTCGGC CGTGCCTGTG GCGTCGCGGG GATTCGTCCT GACGAATATT GTGAACCGAA AATGACCTCC GTGGGATCAC AGGATACCAC TGGGCCGATG ACTCGTGATG AGCTGAAAGA TTTGGCTTGT CTCGGCTTCT CTGCCGATTT GGTCATGCAG TCGTTCTGCC ACACTGCTGC CTATCCGAAG CCGGTTGACG TGACCACGCA CCACACGCTG CCTGATTTCA TCATGAACCG TGGCGGTGTA TCGCTGCGCC CGGGCGATGG GGTTATCCAC TCCTGGCTGA ACCGTATGCT GCTGCCGGAT ACCGTTGGTA CGGGCGGTGA CTCCCACACC CGTTTCCCAA TCGGTATCTC TTTCCCGGCG GGCTCAGGGC TGGTGGCATT TGCTGCTGCC ACGGGCGTGA TGCCGCTGGA TATGCCGGAA TCTGTTCTGG TGCGCTTCAA AGGCAAAATG CAGCCGGGTA TTACCCTGCG CGATCTGGTT CACGCTATTC CGCTGTATGC CATTAAGCAA GGCCTGCTGA CCGTTGAGAA GAAAGGCAAG AAGAACATCT TCTCCGGCCG TATTCTGGAA ATCGAAGGTC TGCCGGATCT GAAAGTCGAG CAGGCGTTTG AACTGACCGA CGCTTCGGCA GAACGTTCTG CGGCGGGTTG TACCATCAAG CTGGATAAAG CGCCGATCAT CGAGTACCTG AGCTCCAACA TCGTGCTGCT GAAATGGATG ATCTCCGAAG GTTACGGCGA TCGCCGTACT CTGGAGCGTC GTGTTCAGGG TATGGAAAAA TGGCTGGCCG ATCCGCAACT GCTGGAAGCG GATGCCGATG CCGAGTATGC GGCAGTGATC GACATCGATC TCGCTGATAT TAAAGAGCCG ATCCTGTGTG CGCCGAACGA TCCAGACGAT GCGCGCTGGT TGTCTGATGT GCAGGGCGAG AAGATCGATG AAGTCTTTAT CGGTTCTTGT ATGACCAACA TCGGGCACTT CCGTGCGGCA GGTAAACTGC TGGATAGCCA CAAAGGCCAA CTGCCGACCC GTCTGTGGGT TGCGCCGCCA ACCAAGATGG ATGCGGCACA ACTGACGGAA GAAGGTTACT ACAGCGTGTT TGGTAAGAGC GGGGCTCGTG TTGAGATCCC TGGCTGCTCG CTGTGCATGG GGAACCAGGC GCGCGTGGCT GACGGCTCTA CCGTGGTTTC TACCTCGACG CGTAACTTCC CGAACCGTTT GGGAACCGGT GCCAATGTGT ATCTGGCGTC TGCCGAACTG GCTGCAGTTG CCTCGCTGCT GGGTCGTTTG CCGACATCGG AAGAGTACCA GACCTATATG TTACAGGTGG ATAAAACCGC GCAGGACACC TATCGCTATC TGAATTTTGA CCAGTTAGGC CAATATACTG AGAAAGCCGA TGGCGTGATC TTCCAGACAA CTGTCTAA
|
Protein sequence | MLEEYRKHVA ERAAQGIVPK PLDATQMAAL VESLKNPSAG EEEVLLDLLI NRVPPGVDEA AYVKAGFLAA VAKGEAASPL VTQEKAIELL GTMQGGYNIH PLIDALDSDK LAPIAAKALS HTLLMFDNFY DVEEKAKAGN AHAKNVIQSW ADAEWFLSRP KLAEKITVTV FKVTGETNTD DLSPAPDAWS RPDIPLHALA MLKNAREGID PDQPGNVGPI KQIEELNKKG FPLAYVGDVV GTGSSRKSAT NSVLWFMGED IPHVPNKRGG GVVLGGKIAP IFFNTMEDAG ALPIEVDVND LNMGDVIDIY PYEGEVRRHD TNEVLATFAL KTDVLLDEVR AGGRIPLIIG RGLTSKARES LGLPHSDVFR ISKAVEASKK GFSLAQKMVG RACGVAGIRP DEYCEPKMTS VGSQDTTGPM TRDELKDLAC LGFSADLVMQ SFCHTAAYPK PVDVTTHHTL PDFIMNRGGV SLRPGDGVIH SWLNRMLLPD TVGTGGDSHT RFPIGISFPA GSGLVAFAAA TGVMPLDMPE SVLVRFKGKM QPGITLRDLV HAIPLYAIKQ GLLTVEKKGK KNIFSGRILE IEGLPDLKVE QAFELTDASA ERSAAGCTIK LDKAPIIEYL SSNIVLLKWM ISEGYGDRRT LERRVQGMEK WLADPQLLEA DADAEYAAVI DIDLADIKEP ILCAPNDPDD ARWLSDVQGE KIDEVFIGSC MTNIGHFRAA GKLLDSHKGQ LPTRLWVAPP TKMDAAQLTE EGYYSVFGKS GARVEIPGCS LCMGNQARVA DGSTVVSTST RNFPNRLGTG ANVYLASAEL AAVASLLGRL PTSEEYQTYM LQVDKTAQDT YRYLNFDQLG QYTEKADGVI FQTTV
|
| |