Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3701 |
Symbol | |
ID | 8532127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4073499 |
End bp | 4074308 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | transcriptional regulator, DeoR family |
Protein accession | YP_003261043 |
Protein GI | 261822937 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.898271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATCCTA CATTAACCGA TGCTTTCCGC ATGAGCGGGG ATAAAGTAAA AGGACAAAGT CGCCTTGATC AGATCATGGA TTATCTGAAA AGCCATAATC TGGTGACGGT AGAGGAACTG GTGTCTGTGA TCGACGCTTC TCCGGCGACG ATCCGTCGTG ATTTAATCAA GCTGGATGAG CAGGGCGTGA TTAGCCGTAG TCATGGTGGC GTGACGTTGA ATCGCTTTAT TCCTTCCCAG CCGACTACGA ACGAGAAACA GCATCGCAAT CTTCAGGAAA AGCAGGCGAT TGCGCGTTAT GCCGCCACAT TGGTTACGCC GGGTAGCGCG GTAGTGCTGG ATGCGGGAAC GACGATGCTG GAATTGGCGC GTAACTTAAC GCATCTGCCG CTGCGCGTGA TTACCGCCGA TTTGCAAATT GCGTTATTTC TGTCTGAATT CAAGCAGATT GAAGTGACGA TTATTGGCGG GCGTATTGAT GACAGCAGCC AATCCTGTAT CGGTGAGCAT GGGCGCCGCC TGCTACGCAA CATTTATCCC GATATTGCAT TTATTAGCTG CAACTCGTGG AGTCTGGATA AAGGGGTGAC CACACCGACG GAAGAAAAAG CCGGTGTGAA GCAAGATCTC GGTGCAAATG CCAGCCGCCG GGTGTTGCTG GCCGATAGCA GTAAATATGG GGCGTATTCC CTGTTCTGCG TGACGCCGCT GTCAGATCTG ACCGATATCA TCACCGACAG CGCGTTAGCG CCCGACGTAC AGGCGCAACT GAAAGGTAAA ACATTTAATC TTACGTTGGT TGGCGGCTGA
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Protein sequence | MDPTLTDAFR MSGDKVKGQS RLDQIMDYLK SHNLVTVEEL VSVIDASPAT IRRDLIKLDE QGVISRSHGG VTLNRFIPSQ PTTNEKQHRN LQEKQAIARY AATLVTPGSA VVLDAGTTML ELARNLTHLP LRVITADLQI ALFLSEFKQI EVTIIGGRID DSSQSCIGEH GRRLLRNIYP DIAFISCNSW SLDKGVTTPT EEKAGVKQDL GANASRRVLL ADSSKYGAYS LFCVTPLSDL TDIITDSALA PDVQAQLKGK TFNLTLVGG
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