Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3672 |
Symbol | |
ID | 8532098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4042797 |
End bp | 4043888 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003261014 |
Protein GI | 261822908 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGAGTC TGGAACTGAA AAACGTCCAC AAAAATTATG GTGCGGTGAA CATCATCAAA GGCGTGGACT TAACGATTCA TGACGGCGAG TTCATGGTCT TTGTCGGCCC GTCGGGCTGT GGAAAATCCA CGCTGCTGCG CATGATTGCC GGGCTGGAAG AAATCAGCAG CGGCGAGTTG CTGATCGACA ACCGCAAGGT GAACGATCTC ACGCCAGCAG AGCGCAAGAT TGCGATGGTG TTCCAGTCGT ACGCGCTCTA TCCGCACCTC TCGGTGCGCA AGAACCTTGC GTTCGGGCTG GAGAATTTGC ACTTCCCCAA AGACGAAATC ATCCGTCGCA TTGATGAAGC GGCCCGTATG CTGGGGCTGG AACCCTATCT GGATCGCAGG CCGCGTGCGC TGTCGGGTGG GCAGCAGCAG CGCGTGGCGA TTGGTCGTGC GATTGTGCGT GAACCTGACC TGTTCCTGTT TGACGAACCG CTCTCCAATC TCGATGCCAA GCTGCGCGTG CAGACGCGCG GCGAGCTGTC CCGCCTGCAT CAGAAGTTGC GCACCACCAT GATCTACGTG ACTCACGATC AGGTGGAAGC GATGACAATG GCGCAGCGCA TTGTGGTGCT GAATGCGGGT CGTATCGAGC AGGTTGGCAC ACCGCTGGAG CTGTTCAATC GGCCGAAAAA TAAGTTTGTC GCGGGCTTCA TCGGCTCACC GCGCATGAAT ATGTTCCCGG CGCAGATCGT CGCCACCGGT GCCGACGGCG TCGAGGTGCA GTGTCCTTCC GGCAATCGTC TGGTGCTGCC GTTTATCGGC ACCGTCGGGC AGAACGTCAC GCTCGGGATT CGTCCTTCAC ACTGTGAGCT GGTGGAGGAA GGTGAGGGGA TCGCGCTGTG CGTCGATCGC TGCGAGATGA TGGGGCATGA AACCTTTATC TACGGGCGAA TGGGCGGTAT TGACGATGAG ATGATCGTCC ATCTGGCGCA GCACCGCGAG TTCGCTGCGG GTGAGTCGGT GTTCGTGCGC TTCCCGCCGA CGTATTGCCA TCTGTTCGAT GGCGAAACGG ATGACACATT GCCGCGTGGT AGCGAGCATT AA
|
Protein sequence | MASLELKNVH KNYGAVNIIK GVDLTIHDGE FMVFVGPSGC GKSTLLRMIA GLEEISSGEL LIDNRKVNDL TPAERKIAMV FQSYALYPHL SVRKNLAFGL ENLHFPKDEI IRRIDEAARM LGLEPYLDRR PRALSGGQQQ RVAIGRAIVR EPDLFLFDEP LSNLDAKLRV QTRGELSRLH QKLRTTMIYV THDQVEAMTM AQRIVVLNAG RIEQVGTPLE LFNRPKNKFV AGFIGSPRMN MFPAQIVATG ADGVEVQCPS GNRLVLPFIG TVGQNVTLGI RPSHCELVEE GEGIALCVDR CEMMGHETFI YGRMGGIDDE MIVHLAQHRE FAAGESVFVR FPPTYCHLFD GETDDTLPRG SEH
|
| |