Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3652 |
Symbol | |
ID | 8532078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4017843 |
End bp | 4018268 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | |
Product | protein of unknown function DUF1240 |
Protein accession | YP_003260994 |
Protein GI | 261822888 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.366554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTGGGG GAGATACAGC CGTGGTTAAA GTAAATAGAC CATTAATTGG TGCGTTTTCT GTTTTTCTTT TATGCCTTTC CATCTGGGGA ACTTGGTTTT CTTTAAGTGA GTATTTATCA TTTATTAAAT TAAGTGATAT AGTTGTTTTT TCATGGAGAG TCGGGCTTGC TATATTTGCA GTTCCTTTGT CATTTTATTT TTCATATGTT TGTTTTTGTT CTGCAATAAA AAATGAACAT GTGAAGATTA ATAATAAATT AGGCGAGTGG TTGGTTAAAT TTCTTATCTT TGGTGCTGTG GTTAGTTTGT TTTCATCATC GTATATATCA TACAGCCTTA GCAATCAGGG TTATAAAACC TGCCCTAAAA TATCTGGAAT GGATCCCAAT AAGTATGTAA AAGAAATTAC TCTTTGTAAA GAATAA
|
Protein sequence | MPGGDTAVVK VNRPLIGAFS VFLLCLSIWG TWFSLSEYLS FIKLSDIVVF SWRVGLAIFA VPLSFYFSYV CFCSAIKNEH VKINNKLGEW LVKFLIFGAV VSLFSSSYIS YSLSNQGYKT CPKISGMDPN KYVKEITLCK E
|
| |