| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3623 |
|---|
| Symbol | |
|---|
| ID | 8532049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 3992720 |
|---|
| End bp | 3993880 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | glycerate kinase |
|---|
| Protein accession | YP_003260966 |
|---|
| Protein GI | 261822860 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.304163 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGTA TGAAAAATGA AACGTTTGTT TTGGCACCGG ACTCCTTCAA GGAAAGTATG
ACGGCAAAAG AAGTGTGTAT TGCCATGGAA AAAGGTCTGA AAAAGATATT CCCTGAAGCG
ACGTATATTC ACGTACCCAT GGCAGATGGC GGTGAAGGCA CCGTGCAATC ATTGATTGAT
GCGACACAGG GCCATATTTT CCAGCAAACG GTGGTTGGCC CACTGGGTGA ACCGGTGGAA
GCAACTTATG GTGTAATGGG CGACGGCGAC ATTGCCGTGA TTGAAATGGC TTCTGCCAGT
GGTATTCACC ATGTCAATCA GGACACTAAA AACCCGTTAA TTACGACGAC TTACGGCACA
GGCCAGTTGA TTCGTGCCTG CTTGGATAAG GGGATCAAAA AAATTATCCT GGGTATCGGT
GGTAGTGCAA CCAACGATGG TGGTGCAGGG ATGGCAGAAG CGCTGGGGGT GAAATTCTAT
GATGAGGCCG GCGAACGGTT AAGTCGTGGT GGTGGTGCAT TAGGAAGGCT ACATCATATT
GATATTTCAA GTATTGATAA GCGTCTTGCT GACATCGATA TTCTGGTGGC GTGTGATGTG
ACTAACCCAT TGTGTGGTGA AAATGGTGCT TCCCATATTT TTGGGCCGCA AAAGGGAGCA
ACGCCTGAAA TGGTCAGCAT GCTCGACGGC AATCTGTCCC ACTATGCCAA CCTTATTAAG
GCACAGTTGG GTAAAGATAT TGCCAGCCAG CCCGGCGCGG GAGCGGCGGG GGGATTGGGA
GCAGGCTTGA TGGCGTTTAC TGGTTGCACG CTGCAAAAAG GCATTGATAT TGTGATTGAG
TACAGCGGGC TAAGGGAGAA ATTGTCTGAA GCCGATTTTT GTTTTACGGG GGAAGGGCGC
ATTGATAGCC AGACCAAATT TGGTAAAACC CCCTACGGTG TGGCAAGAAC GGCGAAGGAG
AATAGCGTCC CGGTGATTGC GGTATCTGGC TGTGTAGGAA GCGGTGTTGA AGATCTCTAT
CAGGAAGGTA TTGATGCCAT CTTCGGTATT ATTCCCCACG CAAAAAGTAT TGATGGTTTA
TTAAAAGAAG GGGCGTTAAA TATGGAGCGT GCCTGTGAAA ATATTGGACG TTTAATTAAG
GCGACGTCTA TCCATCATTA G
|
|---|
| Protein sequence | MMSMKNETFV LAPDSFKESM TAKEVCIAME KGLKKIFPEA TYIHVPMADG GEGTVQSLID
ATQGHIFQQT VVGPLGEPVE ATYGVMGDGD IAVIEMASAS GIHHVNQDTK NPLITTTYGT
GQLIRACLDK GIKKIILGIG GSATNDGGAG MAEALGVKFY DEAGERLSRG GGALGRLHHI
DISSIDKRLA DIDILVACDV TNPLCGENGA SHIFGPQKGA TPEMVSMLDG NLSHYANLIK
AQLGKDIASQ PGAGAAGGLG AGLMAFTGCT LQKGIDIVIE YSGLREKLSE ADFCFTGEGR
IDSQTKFGKT PYGVARTAKE NSVPVIAVSG CVGSGVEDLY QEGIDAIFGI IPHAKSIDGL
LKEGALNMER ACENIGRLIK ATSIHH
|
|---|
| |