| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3571 |
|---|
| Symbol | |
|---|
| ID | 8531997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 3937841 |
|---|
| End bp | 3939427 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_003260914 |
|---|
| Protein GI | 261822808 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.595797 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAAA ACATCACAAT CAAGACGAGC TTGATTGCTT TGTTGAGCAT GATGGTGCTG
CTCTTATTAC TGGTATGTGG AATTGGCATC ACTTCCATCA ATCAGGGGAT CACGTCACTC
ACGACTATCG ACAAGATTCA GGGAAAAGAA GTGACGGCGC TGGCAGGGAG CTACACGGCC
TCGCTGCGTG CCAGAACGGG GGCAGCATTG GCCGCTCGTC AGATGGAAAA CGGACTGACC
GATCTCGCGA ATGCGTCAGT GGCGCGAGCA GAAGCCTACA CGGCACTTTC CCACCAAGAA
ATGGTGCGTT TTCTTTCCTA TGGCACCGTA ACGCAACGCG GTGCCAAAAT GGCGGCAGAG
GTTAAAAGCA ACTACGAGCA ATACATGAAT CTTGGCGTTC AGCCGATGGT CGATGCGCTG
AAACGCGGCG ATGTGAATGC CTATTACGTA CTGTTGCAGG ACGTGCTACC ACCGCTTAGC
GTTGAGATGG ATAAGGTTGC GAACGAATTC CGCGACTTTG GGCTGGAAGT GGGGGAAAAC
ATGCTTACAG AAGCAGAGCG CTTTGCGTTC GAGCGCCTGA CGATCATCGG TATTGCCTGT
CTATTCGTTC TACTGCTGGT GGTGGCTGCC TGGGTTGCCC TGAAACGTTC TATTTTGTCT
CCGCTTGAAG AAACGGTCGA ACAGTTGGAG TTTATTGCCC GTGGCGATTT GACCCAGCCT
ATTGCCGATG GTGGCAATAA TGAGATTGGT CGCCTGGTTC AGGCGATGAA GGCAATGCAG
CATTCGTTAG CCACCGCTGT AGGCCGTGTC CGCGATGCGG GTATGCAGAT CGATGTCGGT
ACGCGCGAGC TATCTTCCGG CAATACCCAT CTGGCCGCCC GCACAGAAGA GTCCGCATCG
TCATTGGAAG AAACTGCCGC CAGTATGGAA CAGTTGACCG CCACGGTGAC GCTCAACGCC
GAGAGTGCGG AACAAGCGCA TACGCTGGCA CAAAATGTGT CAGACATTGC GAATAAAGGC
AGCGATATGG TGGGGAACAT GATTGAGAAG ATGCAGATGA TCTCCAGCAG CTCCGCACGT
ATTGGTGATA TTTTGGCGGT GATTGATAGT ATCGCGTTTC AGACCAATAT TCTGGCGCTG
AATGCGGCCG TTGAAGCCGC GCGGGCGGGT GAGCAGGGGC GGGGGTTTGC TGTGGTTGCG
GGGGAAGTCC GTAATCTGGC GCAGCGCAGT GCGCAATCGG CGAAAGAGAT CAAAACATTG
GTGGAAGAAT CCCAGTGCCG CGTCAGTGAA GGCACCGTGA TGGCAAAAAT GGCGGGCGAA
ACGATGGATG ACGTCTCTGA CGCTGTCGCG CGCGTGACGT CCCTGATGCG TGAGATCTCA
ACGGCAACGC GTGAGCAGAG CAATGGGATT GGGCAGGTGA ATCTGGCGGT ATCGCAGATG
GATGAGGTCG CGCAGCAAAA TGCGTCTCTG GTTGAAGAAT CCGCGGCCGC CACGCGCTCA
TTAGAGGATC AGGCGCGTTT GCTGGCAGAG AGCATGGCGC AGTTTAAAGT GCAGTCGCAG
GCATTTGCCG CCATCGGCCG ATTCTAA
|
|---|
| Protein sequence | MLKNITIKTS LIALLSMMVL LLLLVCGIGI TSINQGITSL TTIDKIQGKE VTALAGSYTA
SLRARTGAAL AARQMENGLT DLANASVARA EAYTALSHQE MVRFLSYGTV TQRGAKMAAE
VKSNYEQYMN LGVQPMVDAL KRGDVNAYYV LLQDVLPPLS VEMDKVANEF RDFGLEVGEN
MLTEAERFAF ERLTIIGIAC LFVLLLVVAA WVALKRSILS PLEETVEQLE FIARGDLTQP
IADGGNNEIG RLVQAMKAMQ HSLATAVGRV RDAGMQIDVG TRELSSGNTH LAARTEESAS
SLEETAASME QLTATVTLNA ESAEQAHTLA QNVSDIANKG SDMVGNMIEK MQMISSSSAR
IGDILAVIDS IAFQTNILAL NAAVEAARAG EQGRGFAVVA GEVRNLAQRS AQSAKEIKTL
VEESQCRVSE GTVMAKMAGE TMDDVSDAVA RVTSLMREIS TATREQSNGI GQVNLAVSQM
DEVAQQNASL VEESAAATRS LEDQARLLAE SMAQFKVQSQ AFAAIGRF
|
|---|
| |