| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3506 |
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| Symbol | nlpD |
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| ID | 8531932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 3856340 |
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| End bp | 3857377 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | lipoprotein NlpD |
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| Protein accession | YP_003260849 |
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| Protein GI | 261822743 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAGCC GAATGATGAA TTTTCGTCAG ATTGCTGCGT GTATGGTGGT TGTCTTAGGG
GTAGCTGGAT GCTCCAACAA TAATTCCAAA TCCGCACCGA TTAGCAGCGT TGACGGAAAC
ACGGGCAGCC GAGGGGGAAT GTTATCTTCG CCACCACCGC GCATTTCAAC GGCAGGTGAA
AATGTGGCAA CAGCGTCCGA TGGCCGGATT GTTTATAACC GTAGCTACGG TAATATCCCG
AAAGGCAGCT ACAGCGGCGG CAATGCCTAT ACCGTTAAGC GGGGAGATAC CCTGTTTTAT
ATCGCCTGGA TTACCGGCAA TGACTACCGG GATCTGGCAC AGCGCAATAA TATTCCAGAG
CCATACAGCC TGAATGTGGG GCAATCGCTG AGTTTAGGTA ATGGAACCGG CAATAATACG
TCGGGCAGTG GTGGCCTGAC GAGCAGCGGC GGCATGTTGG CAACAACCGA CGCCACCCGA
GGTGGCGTAC CAACGCCGCC ATCAAGTGCT CAAATACAAA CTACATCGGT TGATTCTCAG
TCAACTAATG CGTATTCTGC TAATCAGGGT AAACAGAATG TAGGTAAGAT GTTACCTACG
GCAGGGGCAA CAACAACCGC TCCTGTTTCC GCTCCAGCGG CTGTTGCCAG CAGCAATACG
GCTGCTGTAA GCAGTTGGCG TTGGCCTACC GATGGGAAAG TCATAGATAG TTTCTCCGAT
TCTGAAGGGG GAAATAAAGG GATTGATATC GCCGGCTCAC GTGGGCAACC GATCACCGCA
ACCGCCAATG GGCGCGTGGT GTATGCGGGC AATGCGCTAC GTGGTTACGG AAATCTGATA
ATCATCAAGC ATAATGATGA CTACCTCAGT GCCTATGCCC ATAACGATAC GATGCTCGTC
CGTGAGCAAC AAGATGTCAC GGCAGGACAA AAAATCGCTA CGATGGGCAG TACAGGCACC
AGCTCAGTTC GCTTGCACTT TGAAATTCGT TACAAGGGGA AATCCGTAAA CCCGCTGCGT
TTTCTGCCGC AGCGATAA
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| Protein sequence | MGSRMMNFRQ IAACMVVVLG VAGCSNNNSK SAPISSVDGN TGSRGGMLSS PPPRISTAGE
NVATASDGRI VYNRSYGNIP KGSYSGGNAY TVKRGDTLFY IAWITGNDYR DLAQRNNIPE
PYSLNVGQSL SLGNGTGNNT SGSGGLTSSG GMLATTDATR GGVPTPPSSA QIQTTSVDSQ
STNAYSANQG KQNVGKMLPT AGATTTAPVS APAAVASSNT AAVSSWRWPT DGKVIDSFSD
SEGGNKGIDI AGSRGQPITA TANGRVVYAG NALRGYGNLI IIKHNDDYLS AYAHNDTMLV
REQQDVTAGQ KIATMGSTGT SSVRLHFEIR YKGKSVNPLR FLPQR
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