Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3504 |
Symbol | |
ID | 8531930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 3853469 |
End bp | 3855187 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | prolyl-tRNA synthetase |
Protein accession | YP_003260847 |
Protein GI | 261822741 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.298951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTACTA GCCAATACAT GCTCTCCACT CTCAAGGAGA CGCCAGCCGA TGCGGAAGTC ATCAGCCATC AGTTGATGCT CCGTGCAGGA ATGATTCGTA AACTGGCCTC CGGCCTTTAC ACCTGGTTAC CGACCGGTTT ACGTGTTTTG AGAAAAGTTG AAAACATCGT GCGCGAAGAG ATGAACAACG CGGGCGCTAT TGAAGTGTCT ATGCCGGTTG TTCAGCCTGC CGATTTATGG GTTGAAAGTG GACGTTGGGA TCAGTATGGC CCAGAGTTGC TGCGCTTTGT CGATCGTGGT GAACGCCCAT TTGTACTCGG TCCTACACAC GAAGAAGTTA TTACTGACCT GATTCGTAAT GAAGTCAGCT CTTATAAGCA GCTACCACTG AATTTTTTCC AGATTCAAAC CAAATTCCGC GATGAAGTTC GCCCACGTTT TGGCGTAATG CGCTCACGTG AGTTCCTGAT GAAAGACGCC TACTCTTTCC ACACCTCACA GGAATCGTTG CAGACCACCT ACGACGCCAT GTACGCCGCT TACAGCAAGA TTTTCAGCCG TATGGATCTG GATTTCAGAG CCGTCCAGGC AGATACCGGT TCTATCGGTG GTAATGCGTC CCATGAATTC CAGGTACTGG CAACCAGCGG TGAAGACGAT ATCGTTTTCT CAACGGAATC CGACTACGCG GCAAACATTG AACTGGCAGA AGCTGTCGCG CCGAAATTAG GCCGCGCAGA AGCGACGGAA GAACTGCGTG TGGTGGATAC ACCAAACGCC AAGACCATCG CTGAACTGGT TGAACAGTTT ACGCTGCCAG TAGAGAAAAC CGTGAAAACG CTGCTGGTGA AAGCAACGGA AGAAAGCGGC CATAAACTGG TTGCACTGCT GGTTCGTGGC GATCACGAAC TGAATGAAAT CAAGGCTGAG AAAATTGCTC AGGTCGCGAG TCCGCTGACG TTTGCAACGG AAGATGAGAT CCGCGCAATC ATCGGAGCAG GTCCTGGCTC ATTAGGCCCG GTCAAACTGT CGATTCCCGT CGTTGTTGAC CGCACCGTTG CAGCCATGAG CGACTTCAGC GCTGGCGCTA ACATTGATGG CAAACACTAT TTTGGCATCA ACTGGGAGCG TGATGTTGCA CTGCCGCAGG TTGCAGATAT CCGCAACGTG GTTGAAGGCG ACATCAGTCC AGATGGTAAA GGCACACTGC AAATTAAACG CGGTATCGAA GTCGGCCATA TCTTCCAACT GGGCAGCAAG TATTCTGAAG CGTTGAAAGC AACCGTTCAG GGCGAAGACG GACGTAACCA GACGCTGACG ATGGGCTGTT ACGGTATTGG TGTAACACGC GTTGTCGCAG CAGCGATTGA GCAAAACCAT GACGAACGCG GTATTATCTG GCCAGACGCG ATTGCACCTT TCCACGTTGC CATTCTGCCA ATGAACATGC ACAAATCTTT CCGCGTAAAA GAAGTCGCTG AAGACATCTA TCAGCAGTTG CGCGCTAAAG GTATTGAAGT TCTGCTCGAC GATCGTAAAG AGCGTCCGGG TGTGATGTTC GCCGATATGG AGTTGATTGG TGTACCGCAC ACTATCGTGA TTGGCGATCG CAATCTGGAT AGTGAAGAGA TCGAATATAA AAATCGCCGG ATCGGTGAAA AGCAAATGAT TAAAACCGGC GAAATCATCG ATTTCCTGCT GGCGAACATC GTGCGCTAA
|
Protein sequence | MRTSQYMLST LKETPADAEV ISHQLMLRAG MIRKLASGLY TWLPTGLRVL RKVENIVREE MNNAGAIEVS MPVVQPADLW VESGRWDQYG PELLRFVDRG ERPFVLGPTH EEVITDLIRN EVSSYKQLPL NFFQIQTKFR DEVRPRFGVM RSREFLMKDA YSFHTSQESL QTTYDAMYAA YSKIFSRMDL DFRAVQADTG SIGGNASHEF QVLATSGEDD IVFSTESDYA ANIELAEAVA PKLGRAEATE ELRVVDTPNA KTIAELVEQF TLPVEKTVKT LLVKATEESG HKLVALLVRG DHELNEIKAE KIAQVASPLT FATEDEIRAI IGAGPGSLGP VKLSIPVVVD RTVAAMSDFS AGANIDGKHY FGINWERDVA LPQVADIRNV VEGDISPDGK GTLQIKRGIE VGHIFQLGSK YSEALKATVQ GEDGRNQTLT MGCYGIGVTR VVAAAIEQNH DERGIIWPDA IAPFHVAILP MNMHKSFRVK EVAEDIYQQL RAKGIEVLLD DRKERPGVMF ADMELIGVPH TIVIGDRNLD SEEIEYKNRR IGEKQMIKTG EIIDFLLANI VR
|
| |