Gene Pecwa_3482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_3482 
Symbol 
ID8531902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp3826779 
End bp3827999 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content59% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003260826 
Protein GI261822720 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCTTC AGCAACAATC TACATCCTCT ACACAACAAC CAGGGCTTAG CCTGTCTTTG 
ACCCTAATTA TGTCTATCGC GACCGGCCTT GCCGTCGCCA GTAACTACTA TGCCCAGCCG
CTGCTGGAGA CAATTGCCAG AGTCTTTGCG CTTTCCGTTA ACCAGGCGGG ATTCATTGTC
ACCGCCGCAC AGTTGGGTTA TGCCGTTGGC CTGCTGTTTT TGGTGCCGCT GGGGGATATG
TTTGAACGCC GGACGCTGAT TGTCGGCATG ACGCTACTCG CCGCAGGCGG GATGCTGATC
ACCGCTTCGG CACCCACGCT CTGGATAATG ATTGCTGGCA CAGCGTTGAC CGGCTTGTTC
TCCGTTGTCG CGCAGTTGCT GGTTCCTCTT GCCGCAACGC TGGCAACGCC AGAAACGCGC
GGTAAAGTCG TCGGCACAAT AATGAGCGGC CTGCTGCTGG GAATTTTGCT GGCACGCACC
GTGGCGGGCG CGCTGGCTTC ACTCGGTGAC TGGCGCACCG TGTACTGGGT TGCCAGTACG
CTGATGGTCA TCATGGCGCT GATTTTGTGG CGGGCATTGC CGCGCATTCC TCAGCAAAAC
ACGCTGAACT ACCCGCAGTT ACTGGTCTCC ATATTCAGCC TGTTCTCTGC AAATCCGCTG
CTGCGCACGC GCGCGATCCT TGGTTGCCTG TCCTTTGCCA ACTTCAGCAT CCTGTGGACG
TCGATGGCAT TCCTGCTGGC CTCGCCACCC TACAGCTATT CCGAAGGCGT TATCGGTCTC
TTCGGGTTGG TTGGAGCAGC GGGCGCATTA GCGGCTTCAC GCGCCGGGCG ACTGGTCGAT
CAGGGCAAAG CCAAGCCGAC CACCAGCGTT GGGATTATCC TGCTTTTGCT GTCGTGGGGC
TTTATTGCGC TCGGTATTCA TTCCGTGGCG GCGCTGCTCA TGGGGATCAT CGTACTGGAT
CTGGCGGTTC AGGGCGTACA CGTCACCAAC CAGAGCGTGA TCTACCGGAT GATGCCCGAA
GCGCGTAATC GGCTAACGGC AGGCTATATG ACCAGCTATT TCATCGGCGG CGCACTGGGC
TCGCTGCTTT CCGCCTCGGC CTATCAGCAG TGGGGTTGGC TGGGCGTGTG TGCTGCTGGC
GGCATTATCA GCCTGTTGAA CCTGCTGGTG TGGTGGCGCA GCCATCATCA CGAAACACAG
GAAGCGATGG CGGCGCTATA A
 
Protein sequence
MPLQQQSTSS TQQPGLSLSL TLIMSIATGL AVASNYYAQP LLETIARVFA LSVNQAGFIV 
TAAQLGYAVG LLFLVPLGDM FERRTLIVGM TLLAAGGMLI TASAPTLWIM IAGTALTGLF
SVVAQLLVPL AATLATPETR GKVVGTIMSG LLLGILLART VAGALASLGD WRTVYWVAST
LMVIMALILW RALPRIPQQN TLNYPQLLVS IFSLFSANPL LRTRAILGCL SFANFSILWT
SMAFLLASPP YSYSEGVIGL FGLVGAAGAL AASRAGRLVD QGKAKPTTSV GIILLLLSWG
FIALGIHSVA ALLMGIIVLD LAVQGVHVTN QSVIYRMMPE ARNRLTAGYM TSYFIGGALG
SLLSASAYQQ WGWLGVCAAG GIISLLNLLV WWRSHHHETQ EAMAAL