Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3482 |
Symbol | |
ID | 8531902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 3826779 |
End bp | 3827999 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003260826 |
Protein GI | 261822720 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTCTTC AGCAACAATC TACATCCTCT ACACAACAAC CAGGGCTTAG CCTGTCTTTG ACCCTAATTA TGTCTATCGC GACCGGCCTT GCCGTCGCCA GTAACTACTA TGCCCAGCCG CTGCTGGAGA CAATTGCCAG AGTCTTTGCG CTTTCCGTTA ACCAGGCGGG ATTCATTGTC ACCGCCGCAC AGTTGGGTTA TGCCGTTGGC CTGCTGTTTT TGGTGCCGCT GGGGGATATG TTTGAACGCC GGACGCTGAT TGTCGGCATG ACGCTACTCG CCGCAGGCGG GATGCTGATC ACCGCTTCGG CACCCACGCT CTGGATAATG ATTGCTGGCA CAGCGTTGAC CGGCTTGTTC TCCGTTGTCG CGCAGTTGCT GGTTCCTCTT GCCGCAACGC TGGCAACGCC AGAAACGCGC GGTAAAGTCG TCGGCACAAT AATGAGCGGC CTGCTGCTGG GAATTTTGCT GGCACGCACC GTGGCGGGCG CGCTGGCTTC ACTCGGTGAC TGGCGCACCG TGTACTGGGT TGCCAGTACG CTGATGGTCA TCATGGCGCT GATTTTGTGG CGGGCATTGC CGCGCATTCC TCAGCAAAAC ACGCTGAACT ACCCGCAGTT ACTGGTCTCC ATATTCAGCC TGTTCTCTGC AAATCCGCTG CTGCGCACGC GCGCGATCCT TGGTTGCCTG TCCTTTGCCA ACTTCAGCAT CCTGTGGACG TCGATGGCAT TCCTGCTGGC CTCGCCACCC TACAGCTATT CCGAAGGCGT TATCGGTCTC TTCGGGTTGG TTGGAGCAGC GGGCGCATTA GCGGCTTCAC GCGCCGGGCG ACTGGTCGAT CAGGGCAAAG CCAAGCCGAC CACCAGCGTT GGGATTATCC TGCTTTTGCT GTCGTGGGGC TTTATTGCGC TCGGTATTCA TTCCGTGGCG GCGCTGCTCA TGGGGATCAT CGTACTGGAT CTGGCGGTTC AGGGCGTACA CGTCACCAAC CAGAGCGTGA TCTACCGGAT GATGCCCGAA GCGCGTAATC GGCTAACGGC AGGCTATATG ACCAGCTATT TCATCGGCGG CGCACTGGGC TCGCTGCTTT CCGCCTCGGC CTATCAGCAG TGGGGTTGGC TGGGCGTGTG TGCTGCTGGC GGCATTATCA GCCTGTTGAA CCTGCTGGTG TGGTGGCGCA GCCATCATCA CGAAACACAG GAAGCGATGG CGGCGCTATA A
|
Protein sequence | MPLQQQSTSS TQQPGLSLSL TLIMSIATGL AVASNYYAQP LLETIARVFA LSVNQAGFIV TAAQLGYAVG LLFLVPLGDM FERRTLIVGM TLLAAGGMLI TASAPTLWIM IAGTALTGLF SVVAQLLVPL AATLATPETR GKVVGTIMSG LLLGILLART VAGALASLGD WRTVYWVAST LMVIMALILW RALPRIPQQN TLNYPQLLVS IFSLFSANPL LRTRAILGCL SFANFSILWT SMAFLLASPP YSYSEGVIGL FGLVGAAGAL AASRAGRLVD QGKAKPTTSV GIILLLLSWG FIALGIHSVA ALLMGIIVLD LAVQGVHVTN QSVIYRMMPE ARNRLTAGYM TSYFIGGALG SLLSASAYQQ WGWLGVCAAG GIISLLNLLV WWRSHHHETQ EAMAAL
|
| |