Gene Pecwa_3477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_3477 
Symbol 
ID8531897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp3821319 
End bp3822521 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content58% 
IMG OID 
Productglycine betaine transporter membrane protein 
Protein accessionYP_003260821 
Protein GI261822715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAT CAACCTCAAA TCCGTGGGAC ACCACCACGA CACAAAATCA GCCAGCCGAT 
CACACGGCTG ATAGTGCGAC ACCAGCACAG CACGGTTCGA CGCCAGATAG CACACCACAG
AGCGATCCCT GGTCTACCAG CGCACCTACT CAAGATGCAC CGGCTAACAG CAGCGATGCC
TGGAGCAGCG CACCGGCTCC CGATGGTTCT ACCGATGCCG CCCATCAGGC TGCGCAATCC
GGCAGTGACT GGCTAAACAG CGCCGCCCCC TCGACGCCTG AGCATTTTAA TCTGCTCGAC
CCGTTTAAGG ACACGCTGAT CCCACTGGAC AGTTGGGTCA CCCACGGTAT CGACTGGGTT
GTCCTGCACT TCAGACCGAT CTTCCAAGGC ATTCGCGTGC CGGTCGATTT TATTCTGGGC
GGCTTTCAAC AATTCCTGCT GGGGATGCCT GCGCCGATTG CCATTCTGGT GTTTTCGCTG
ATTGCCTGGC AGATGTCCAG CCTCGGTATG GGCGTGGCAA CCCTACTGTC TCTGATTGCG
ATTGGCGCGA TTGGTGCCTG GTCACAGGCC ATGATCACGT TAGCGCTGGT GCTGACCGCA
CTGTTCTTCT GCGTACTTAT CGGACTCCCT ATGGGGATCT GGCTGGCGCG TAGCGAACGA
GCCGCCAAGA TTATTCGTCC ACTGCTCGAT GCCATGCAGA CTACGCCCGC GTTCGTCTAT
TTGGTGCCTA TCGTCATGCT GTTCGGTATC GGTAACGTGC CGGGTGTGGT GGTGACCATT
ATCTTTGCCC TGCCGCCGAT TATCCGCTTA ACGATTCTGG GTATTCGCCA GGTTCCCGCC
GATCTGGTTG AGGCCGCGGA GTCATTCGGT GCCAGCCCAC GCCAGATGCT GTTTAAGGTT
CAACTGCCGC TGGCCATGCC GACCATCATG GCCGGTGTTA ACCAGACGCT GATGCTGGCA
CTGTCGATGG TGGTTATCGC CTCGATGATC GCCGTGGGTG GTTTAGGCCA GATGGTACTG
CGCGGGATTG GCCGTCTGGA TATGGGTCTG GCTGCCGTCG GCGGTGTCGG GATTGTTATT
CTGGCCATTA TTCTTGACCG TCTTACCCAG TCTCTGGGGC GCGATCGTCG CAGCAAGGGC
AATAAAAGCT GGTACGCCAG CGGCCCAATT GGCCTGCTGA CCCGTCCTTT CATCAAGCAG
TAA
 
Protein sequence
MSKSTSNPWD TTTTQNQPAD HTADSATPAQ HGSTPDSTPQ SDPWSTSAPT QDAPANSSDA 
WSSAPAPDGS TDAAHQAAQS GSDWLNSAAP STPEHFNLLD PFKDTLIPLD SWVTHGIDWV
VLHFRPIFQG IRVPVDFILG GFQQFLLGMP APIAILVFSL IAWQMSSLGM GVATLLSLIA
IGAIGAWSQA MITLALVLTA LFFCVLIGLP MGIWLARSER AAKIIRPLLD AMQTTPAFVY
LVPIVMLFGI GNVPGVVVTI IFALPPIIRL TILGIRQVPA DLVEAAESFG ASPRQMLFKV
QLPLAMPTIM AGVNQTLMLA LSMVVIASMI AVGGLGQMVL RGIGRLDMGL AAVGGVGIVI
LAIILDRLTQ SLGRDRRSKG NKSWYASGPI GLLTRPFIKQ