| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3407 |
|---|
| Symbol | |
|---|
| ID | 8531825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 3741508 |
|---|
| End bp | 3742614 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | adenine DNA glycosylase |
|---|
| Protein accession | YP_003260752 |
|---|
| Protein GI | 261822646 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0148197 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAAG CGCAACAGTT CGCCCATCAG GTGCTGGACT GGTATCAACG CTATGGCCGC
AAAACCCTGC CATGGCAGCT TGAGAAAACG CCCTATAAAG TATGGCTATC CGAAGTGATG
CTGCAACAAA CGCAGGTCAC CACGGTTATT CCTTATTTCC AACGCTTTAT GGCACGCTTT
CCCAACGTGA ACGCACTGGC GGCAGCACCG CTGGATGAAG TGCTCCACTT ATGGACTGGG
CTGGGCTACT ACGCCCGTGC GCGTAATCTA CACAAAGCCG CGCAGACCAT TGTGTCGCGC
CACGGCGGTG ATTTCCCCAC CACCTTTGAT GAAGTCGCGG CGTTACCGGG CGTCGGGCGC
TCTACCGCAG GCGCGGTGTT GTCGCTCTCT CTCGGCCAGC ATTTCCCGAT CCTTGACGGC
AACGTGAAGC GCGTGCTGGC ACGCTGCTAC GCCGTTGACG GCTGGCCGGG CAAGAAAGAA
GTCGAAAAGA AACTGTGGGC GCGCAGTGAG GATGTGACAC CCGCCGAAGG CGTCAGCCAG
TTTAATCAGG CGATGATGGA CCTCGGTGCG ATGGTTTGCA CCCGCAGTCG CCCCAAGTGC
GAACTGTGCC CTCTGAACAC CGGCTGCATT GCTTACGCTA ACCACAGTTG GGCGCAATAT
CCCGGTAAGA AACCGAAGCA GACACTGCCG GAAAAAACGG GCTGGTTCCT GCTGATGCAA
CAGGACTCTC AGGTCTGGCT GCAACAGCGC CCTACCGTGG GCCTGTGGGG TGGGCTATTT
TGCTTCCCAC AGTTCAGTGA ACGTCAGGAA TTGGAACTCT GGCTGCAACA ACGCGGTCTG
AATCCTGATG GATTGCAACA GCTTGTAGCG TTCCGCCACA CATTCAGCCA TTTTCATCTG
GATATTGTTC CGCTCTGGCT GAACGTATCG CAGGACGATC GTTCACAAAA CAGGTCCTGC
ATGGATGACG GTGCGGGTCT CTGGTATAAC TTAGCGCAGC CGCCGTCTGT CGGACTGGCC
GCCCCGGTAG AACGCCTACT GAGGGAACTG GCTCACCCAC AGTCAACACG TTTAAATGCC
TGCGCAATTG ATGAGGAAGA AGCATGA
|
|---|
| Protein sequence | MMQAQQFAHQ VLDWYQRYGR KTLPWQLEKT PYKVWLSEVM LQQTQVTTVI PYFQRFMARF
PNVNALAAAP LDEVLHLWTG LGYYARARNL HKAAQTIVSR HGGDFPTTFD EVAALPGVGR
STAGAVLSLS LGQHFPILDG NVKRVLARCY AVDGWPGKKE VEKKLWARSE DVTPAEGVSQ
FNQAMMDLGA MVCTRSRPKC ELCPLNTGCI AYANHSWAQY PGKKPKQTLP EKTGWFLLMQ
QDSQVWLQQR PTVGLWGGLF CFPQFSERQE LELWLQQRGL NPDGLQQLVA FRHTFSHFHL
DIVPLWLNVS QDDRSQNRSC MDDGAGLWYN LAQPPSVGLA APVERLLREL AHPQSTRLNA
CAIDEEEA
|
|---|
| |