Gene Pecwa_3360 details

Gene Information

• Locus tag: Pecwa_3360
• Symbol: rpsB
• ID: 8531775
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 3686380
• End bp: 3687105
• Gene Length: 726 bp
• Protein Length: 241 aa
• Translation table: 11
• GC content: 50%
• Product: 30S ribosomal protein S2
• Protein accession: YP_003260705
• Protein GI: 261822599

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.720807
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAACTG TTTCCATGCG CGATATGCTC AAGGCTGGCG TACACTTTGG TCACCAGACC 
CGTTACTGGA ACCCGAAAAT GAAGCCATTC ATCTTCGGTG CGCGTAACAA AGTTCACATC 
ATCAACCTTG AAAAAACCGT ACCAATGTTC AACGATGCTT TGGCTGAACT GAGCAAAATT 
GCTTCTCGCA AAGGCAAAAT TCTGTTCGTT GGTACTAAAC GCGCAGCAAG CGAAGCGGTA 
AAAGATGCAG CCAACAACTG CGATCAGTTC TTCGTGAACC ATCGCTGGTT GGGCGGTATG 
CTGACTAACT GGAAAACCGT TCGTCAGTCC ATCAAGCGTT TGAAAGATCT GGAAACCCAA 
TCTCAAGACG GCACGTTCGA CAAGCTGACC AAAAAAGAGG CGCTGATGCG CACTCGTGAA 
CTGGACAAGC TGGAAAACAG CCTGGGCGGT ATCAAAGATA TGGGCGGTCT GCCAGACGCG 
CTGTTCGTTA TCGACGCCGA TCACGAGCAC ATCGCAATCA AAGAAGCTAA CAACCTGGGT 
ATTCCGGTAT TCGCTGTGGT TGATACCAAC TCCGATCCAG ATGGCGTTGA CTACATCATC 
CCTGGTAACG ATGACGCAAT CCGTGCAGTT AGCCTGTACC TGAGCGCTGT TGCTACTGCT 
GTCCGCGAAG GCCGTTCTCA AGATCTGGCT GTGCAGGCAG AAGAAGGCTT AGTAGAAGCT 
GAATAA 

 

Protein sequence

MATVSMRDML KAGVHFGHQT RYWNPKMKPF IFGARNKVHI INLEKTVPMF NDALAELSKI 
ASRKGKILFV GTKRAASEAV KDAANNCDQF FVNHRWLGGM LTNWKTVRQS IKRLKDLETQ 
SQDGTFDKLT KKEALMRTRE LDKLENSLGG IKDMGGLPDA LFVIDADHEH IAIKEANNLG 
IPVFAVVDTN SDPDGVDYII PGNDDAIRAV SLYLSAVATA VREGRSQDLA VQAEEGLVEA 
E