Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3320 |
Symbol | |
ID | 8531735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 3642719 |
End bp | 3643888 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | type I secretion membrane fusion protein, HlyD family |
Protein accession | YP_003260666 |
Protein GI | 261822560 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGCA TCACGATCCA TGATGACCTG AGACGCCAGG GTCGACGCGT ATCCGTCATT ATCTGGCTCA GCCTGCTGGG GCTGGTCGTC TTTTTTGTCT GGGCCAAATT CGCCGTGCTG GATGAGGTAT CGGTCGGGAC CGGCAAGGTG ACGCCCTCGA CCCGCGCCCA GGTGATTGAA AGCCTGGATG GCGGGATCAT CGGTCAGTTG TACGTGCAAC AGGGCAATGT CGTCGAGAAA GGGCAGGTAT TGGCACAGTT GGACATCAAC CGCTTTCAGT CCGTCTACGG CGAAGCGTTC TCCCGCGTAC AGACGCTGCG AGCGTCTGCT GAACGTCTGT ACGCCGAACT CAGCGGCGAA CCGCTAAAAT TCAGCGCGGA AACCATGAAG GAGCCTGCAC TGGCCGCACG TGAACGTCAG CTTTATGAAT CACGCCTGCG CAATCGCGAT GAAACGATCG CCAACCTGCA ACAGTCTATG CGACTGGTCG AGCAGGAGCT ACGCATGACG GAGCCGTTGG TGCAGCGCGG GGCCGCCAGC GCCGTCGAAG TGATCCGGTT ACGCCGCCAG ATTAGCGAAA TCCGCGGCAA AATCGACGAA GCCAGCAACC AGTATGCGGT GCGGGCGCGA GAAGAACAGG TTAAAAACAA CGCCGATCTG GAAGCGCAGC GGGAAGTGGT CAGCGGGAAA GCCGATCAGC TCAAGCGTGC TACCATCACC TCACCGGTGC GCGGAATTGT GAAAGACATT CAGGTCACGA CCGTCGGCGG CGTGCTGCAA CCGGGTGGTA AACTGATGGA GATCGTACCG CTGGAAGATC AGTTGCTGAT TGAAACACGC ATCAACCCAC GTGATATTGC CTATATTCGG CCGGGTTTGC CCGCCACGGT AAAAATCACC GCCTATGATT CTTCCATCTA CGGTAATTTA ACCGGCGAAG TCGAAAGCGT GTCGCCGGAT ACCCTTCAGG ACGAAGTCAG GCGCGACCAG TTTTACTATC GGGTCTATGT GCGTACCACG CAGGCGGAAC TGACCAACAA GGCCGGTGAA AAATTCCCCA TCGTACCCGG CATGGTCGCC AGCGTTGAGA TAAGAACGGG ACAGAAAAGC GTCTTAGACT ATTTGGTTAA ACCGCTGAAC AAGGTCAATG AAGCACTGCG AGAACGTTAA
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Protein sequence | MSSITIHDDL RRQGRRVSVI IWLSLLGLVV FFVWAKFAVL DEVSVGTGKV TPSTRAQVIE SLDGGIIGQL YVQQGNVVEK GQVLAQLDIN RFQSVYGEAF SRVQTLRASA ERLYAELSGE PLKFSAETMK EPALAARERQ LYESRLRNRD ETIANLQQSM RLVEQELRMT EPLVQRGAAS AVEVIRLRRQ ISEIRGKIDE ASNQYAVRAR EEQVKNNADL EAQREVVSGK ADQLKRATIT SPVRGIVKDI QVTTVGGVLQ PGGKLMEIVP LEDQLLIETR INPRDIAYIR PGLPATVKIT AYDSSIYGNL TGEVESVSPD TLQDEVRRDQ FYYRVYVRTT QAELTNKAGE KFPIVPGMVA SVEIRTGQKS VLDYLVKPLN KVNEALRER
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