Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3260 |
Symbol | |
ID | 8531676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 3557490 |
End bp | 3559373 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | peptidyl-prolyl cis-trans isomerase (rotamase D) |
Protein accession | YP_003260609 |
Protein GI | 261822503 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGACA ATTTACGTAC GGCCGCGAAT AACGTCGTGC TCAAAATTAT TCTTGCTTTG ATCATCGCAT CATTCGTTTT AACTGGCGTT GGTGATTATC TTATTGGTGG TTCCGGAGAT TACGCGGCAA AAGTGAACGG GCAGGAAATT ACCCGCGGAC AGCTTGAGCA AGCGGTACAG AACGAACGCA GTCGTCAGCA GGAAGCCTTG GGAGAGAATT TCTCTATCCT GGCTAGTAAT GACGGTTATA TGCAGCAATT GCGTAAGCAG GCACTCTCCC AACTGATTGA TGAAACCTTG CTGGATCAGT ATGCCAACAA GCTGGGGTTG AACATCAGCG ATGAGCAAAT CAGACAGGCG ATCTTTGACG TTCCCGCGTT TCAGACAAAC AAGCATTTTG ATAATGAAAA ATATTTGGAT CAGGTTCGCC GCCTTGGCGT AACGCCGGAT ATGTATGCTC AGATGTTACG TAAGCAATTG ACTTCACAAC AGTTGATTCG TGGTTTTGGC AACACCGCAT TCCTGCTGCC GCAGGAGATC GACAATCTGG TGAAGCTGGC TGCACAAGAT CGCGTTGTTC GTGTAGCAAC CATTGATGTC GCTGCCAAGG CGAAAGCCCT GACGGTTGCT GATGATGAAG TACAGAGCTA TTACGATCAA AATAAAGGGC GTTTCATCGC ACCAGAAGAA TTCAAAGTCA GCTATATCAC GCTGGATGCT GCAAGCATCA TGGACAATGT GAAAATAGAT GATAAGGCCA TCAATGATTT CTACGAGCAG AATAAGAACG ACTATTCCCA ACCTGAACGC AAAAAATTCA GCGTCATTCA GGTGAAGAAT GAGGCAGATG CAACGTCTGT TCTGGATGCG TTGAAGCAAG GTGGTGATTT CGCTACGCTG GCGAAAGAGA AATCAACCGA CATCATCTCG CGCCGTAATG GTGGCGATCT GGGATGGATG GACGAAAACA GCACGATTGA TGAGCTTAAG CAGGCAAAAC TGGCGGAGAA AGGCCAGGTT TCCTCAGCAA TTAAATCCTC TGTTGGCTAC CTTATTGTGC GTCTGGATGA TGTTCAACCG CAGCAGGTTA AACCGCTGAG CGACGTGCGT GCTGAGATCG CTGAAAAAGT GAAGCACGAA AAAGCGCAGG ATGGGTTCTA CGCGCTACAA CAAAAAGTGA GTGAGGCGGC TAGCAATGAC AACGAGTCCC TGGCTTCAGC AGAAGAAGCG GCGGGTATTA AAGCAACGCA GACCGACTGG TTTACGCGTG AGCAGGTTCC TGCTGCACTG AACTTCAAGC CGGTAACGCA ATCCATCTTT AATGGCGCAC TGCTGGGAGA AAATGGTGCT GCGGGCAATA ACTCCGATGT GATTAACGTT GACGGCGACC GTGCGTTTGT TCTGCGTATC ACCGAATATA GGCCTGAAAG CACTCGTCCT CTGGATCAGG TCCGTACCGA GATCGTAGAG GCGCTGAAAC GTCAGAAGGC TGAGCAGCAG GCTCGCGTAG ACGCTGAGAA AATTCTGGCT GAGCTAAAAC AAGGTAAAGA CGACGCACTT AAAGCCGCAG GATTGAGCTT TGGTCAGGCA AAAACGCTGT CCTCTATCTC TCAAGGCGAT GCAACGGCAG AGGCCATTTT TGCTATGCCG CATCCAGAGA AAGATAAGCC GTCTTATACG ATTACCCAGG ATCAGGCCGG TAACATCGTG CTGGCTGCGC TGGATAGCGT AACGCCACAT CAGCTAAATG ATGAGCAGAA AACACAGTTT GCCAGCCAGG TTCAGCAAGG CTCTCTGGGG GCGCTGTTTG ATTCTCTGCT GTCTAGCTTG CGTAGTGAAG CGAAAATCAA GATGGGCAAT GCGGCGGCGC AGGAACAGCA ATAA
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Protein sequence | MMDNLRTAAN NVVLKIILAL IIASFVLTGV GDYLIGGSGD YAAKVNGQEI TRGQLEQAVQ NERSRQQEAL GENFSILASN DGYMQQLRKQ ALSQLIDETL LDQYANKLGL NISDEQIRQA IFDVPAFQTN KHFDNEKYLD QVRRLGVTPD MYAQMLRKQL TSQQLIRGFG NTAFLLPQEI DNLVKLAAQD RVVRVATIDV AAKAKALTVA DDEVQSYYDQ NKGRFIAPEE FKVSYITLDA ASIMDNVKID DKAINDFYEQ NKNDYSQPER KKFSVIQVKN EADATSVLDA LKQGGDFATL AKEKSTDIIS RRNGGDLGWM DENSTIDELK QAKLAEKGQV SSAIKSSVGY LIVRLDDVQP QQVKPLSDVR AEIAEKVKHE KAQDGFYALQ QKVSEAASND NESLASAEEA AGIKATQTDW FTREQVPAAL NFKPVTQSIF NGALLGENGA AGNNSDVINV DGDRAFVLRI TEYRPESTRP LDQVRTEIVE ALKRQKAEQQ ARVDAEKILA ELKQGKDDAL KAAGLSFGQA KTLSSISQGD ATAEAIFAMP HPEKDKPSYT ITQDQAGNIV LAALDSVTPH QLNDEQKTQF ASQVQQGSLG ALFDSLLSSL RSEAKIKMGN AAAQEQQ
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