Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3252 |
Symbol | |
ID | 8531668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 3549287 |
End bp | 3551092 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | putative multidrug transporter membraneATP-binding components |
Protein accession | YP_003260601 |
Protein GI | 261822495 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.191374 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGTGCC TCAGCCAGAA GGAACGACAA ATGAATAGCC CTCAGCCGTT TTGGCCAACC CTTAAGCGCC TGCTGGCCTA TAGCTCTCCC TGGCGGAAAA CGCTGATGTT CGGTGTCCTG ATGCTGTGGG TTGCCGCGAT TGCGGAAGTC TCAGGCCCCG TGTTGGTAAG CTATTTCATT GACGATCTGG TGACAAAAGG CCAATTCCCG CTGGCGATTG CGGTAGGTCT GGCAATGGCC TATATCTTGC TGCATATTCT GGCCGCCTCG CTGCACTATT TCCAGACGCT GTTGTTTAAC CGAGTCGCCG TCGGCGTTGT GCAGCAACTG CGTATTGATG TGATGGATGC GGCTTTGCGT CAGCCGCTGA GTACATTTGA TACGCAACCT GTCGGGCAGT TGATTTCACG CGTCACCAAT GACACCGAGG TGGTTAAAGA TCTCTACGTC ATGGTGGCAT CAACGGTATT ACGCAGCGCG ACACTGGTCG GGGCAATGCT GGTGGCGATG TTCAGCCTGA GCTGGCAAAT GGCGCTGGTT GCGTTGATGA TTTTTCCTGC AGTAGCGACG GTCATGGCGC TCTACCATCG TTTTAGTACG CCGATTGTGC GTAAGATTCG GCGCTATTTA GCAGACATTA ATGATGGTTT CAACGAAGTG ATTAATGGCA TGGGCGTCAT TCAGCAATTC CGCCAGCAGG CGCGTTTTGG TAAGAAACTA GGCGCAGCCA GCCATGAGCA TTACGAGGCA CGCATGAAGG CTTTGCGTCT GGAGGGATTC TTGCTACGGC CGCTGCTGAG TCTGTTTGCC GCAATGGTTC TCTGCGGATT GTTGATCCAG TTCGGTTTTA GCTCGGTTGG CGCGGTTGGT GTTGGGGTTT TGTACGCCTT TATCAATTAC CTTGGCCGTC TGAATGAACC GCTAATTGAG CTGACGACCC AGCAGTCGAT GTTGCAGCAG GCGGTTGTTG CTGGCGAGCG TATCTTTGAA TTGATGGATG GTGCAAAGCA AGGCTACGGA AACGACGATC GTCCTATGGT CTCAGGGCGT GTTGATATTA ACGATGTCTC TTTCTCTTAT GGCACAGAAA AACGTGTGCT CCAGCATATC TCTCTGACGA TACCCGATCG CGGGTTCGTC GCGTTGGTAG GGCATACCGG CAGTGGAAAA AGTACATTAG CCAGTTTGCT TATGGGGTAT TACAGCCCGG ATGAGGGCGA AATTCGGCTT GATGGCCGGC CATTATCGAC GCTCTCCCAT CGTATCTTGC GCCAAAATGT GGCAATGGTA CAGCAGGATC CGGTGGTGCT GGCGGAGTCC ATGTTTGTGA ATGTGACTCT GGGGCGCGAT ATTAGCGAAG AAGCCGTCTG GCGCGTGCTG GAAGTGGTGC AGCTTGCTGA GTTGGTTCAT GGTTTCCCCG ACGGATTACA TACGCGTCTT GGTGAGCAGG GGAATAATCT GTCTACCGGA CAAAAGCAAC TGTTGGCGAT TGCGCGGGTA CTGGTGCAAA CGCCTAAAAT CCTGATTCTC GATGAAGCGA CTGCGAATAT TGACTCAGGT ACGGAGCAAG CGGTGCAAAA GGCGCTGCGC ATCATTAGGG AACAGACAAC CTTAATTATC ATTGCACACC GGCTTTCCAC CATTGTTGAG GCTGATACGA TTATGGTGCT CCATCATGGA CAAACCGTTG AGCGGGGAAC GCATGAGCAA CTGCTGCAAC AGCAGGGGCG CTATTATCAA ATGCATCAGT TGCAACTGGC CGGAGAAGAT CTCGCTACTC CCAGTACTGA GCCTTGCTCC GTATAA
|
Protein sequence | MMCLSQKERQ MNSPQPFWPT LKRLLAYSSP WRKTLMFGVL MLWVAAIAEV SGPVLVSYFI DDLVTKGQFP LAIAVGLAMA YILLHILAAS LHYFQTLLFN RVAVGVVQQL RIDVMDAALR QPLSTFDTQP VGQLISRVTN DTEVVKDLYV MVASTVLRSA TLVGAMLVAM FSLSWQMALV ALMIFPAVAT VMALYHRFST PIVRKIRRYL ADINDGFNEV INGMGVIQQF RQQARFGKKL GAASHEHYEA RMKALRLEGF LLRPLLSLFA AMVLCGLLIQ FGFSSVGAVG VGVLYAFINY LGRLNEPLIE LTTQQSMLQQ AVVAGERIFE LMDGAKQGYG NDDRPMVSGR VDINDVSFSY GTEKRVLQHI SLTIPDRGFV ALVGHTGSGK STLASLLMGY YSPDEGEIRL DGRPLSTLSH RILRQNVAMV QQDPVVLAES MFVNVTLGRD ISEEAVWRVL EVVQLAELVH GFPDGLHTRL GEQGNNLSTG QKQLLAIARV LVQTPKILIL DEATANIDSG TEQAVQKALR IIREQTTLII IAHRLSTIVE ADTIMVLHHG QTVERGTHEQ LLQQQGRYYQ MHQLQLAGED LATPSTEPCS V
|
| |