Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3165 |
Symbol | |
ID | 8531580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 3447447 |
End bp | 3448346 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003260514 |
Protein GI | 261822408 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000392866 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTTAT CGATAAAACA ATTACGGGCC TTTATCGCGT TGACAGAAAC TGATAATTTC ACGCGTGCCG CCCAGAAAAT AAATCTCTCT CAGCCTGCAT TTAGTTCATT AATTGCCGGG TTAGAGGAAG AGGTCGGCTA TCGGTTATTT GACCGTGATA CCCGTAAAGT GCAACTCAAT GCTGATGGGC TCCATTTCAT TGAGATTGCC CGTCGTCTGG TGCAAACCCA TGATGATGCT GTCGGTGAGA TCAAGTCTTA TGCCACCGGA TATAAAGGGA AAATTGTGTT GGCGGTACTG CCGTCAATGG CGGTGGAATG GTTGCCTCAG GTATTGACGC AGTATCACCG GGCTTACCCC AAGATTAAGG TCGAGCTGTT GGATACACAG TGGGATCGTT GTCTGAAAGC GGTGCTGGAT GGTCACGCCG ATCTGGCGCT GACGGCAGGG CAGCCATCGC CGGGAACGTT TAGCTCCCGC ATGCTGTTCG CCGATAGCTT CTATCTGATC TGCCATAACC AGCACCCGCT GGCACAACGC GCTAATGTTG ATGTGGTTGA TGTGGTGCAG TATCCGTTTG TTGGGTTTTG CAAAGGCACC AGTATCCGGC AGTACACCGA TCAGCTTATC GAACCGGAAG GCTTTAACTA CGTGCTGGAA GTGCGTCAGT TGACCACAAT GATGGGGCTG GTGGCGGCAA ATTATGGTGT GAGTATTGTT ACGGGGCTGA CGCTGTTCCA GTTCCAGCAC AAAGACATTG CGATTATCCC GTTTCGGGAT TTATCGTTGC AGCGCGGTAT CTATCTGGTT ACGGATAAAG AACGCCAGCT TTCGGTGTGT GCGAAAGAGT TTTATGATTT TCTTCTGGAA CGGGCAGAAA GTTTTGTGCC CGCTACGTGA
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Protein sequence | MNLSIKQLRA FIALTETDNF TRAAQKINLS QPAFSSLIAG LEEEVGYRLF DRDTRKVQLN ADGLHFIEIA RRLVQTHDDA VGEIKSYATG YKGKIVLAVL PSMAVEWLPQ VLTQYHRAYP KIKVELLDTQ WDRCLKAVLD GHADLALTAG QPSPGTFSSR MLFADSFYLI CHNQHPLAQR ANVDVVDVVQ YPFVGFCKGT SIRQYTDQLI EPEGFNYVLE VRQLTTMMGL VAANYGVSIV TGLTLFQFQH KDIAIIPFRD LSLQRGIYLV TDKERQLSVC AKEFYDFLLE RAESFVPAT
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