Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3149 |
Symbol | |
ID | 8531564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 3433671 |
End bp | 3434141 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | rRNA large subunit methyltransferase |
Protein accession | YP_003260498 |
Protein GI | 261822392 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.788661 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTGC AACTGGTCGC CGTTGGCACC AAAATGCCCG ACTGGGTGCA GACTGGTTTC ACCGATTATC TGCGGCGCTT CCCGAAGGAC ATGCCTTTCG AATTACTCGA AATTCCGGCG GGGAAACGGG GCAAAAATGC CGATATTAAA CGCATTCTGG AGCGCGAAGG CGAACAGATG CTGGCGGCGG TGGGCAAAGG CAACCGTATT GTTACTCTGG ATATTCCAGG TACTCGCTGG GAAACGCCGC AGTTGGCGCA ACAGCTAGAG CGCTGGAAAC AGGATGGGCG CGATGTCAGT CTGCTGATTG GCGGACCTGA AGGGCTTGCG CCGGAATGCA AAGCCGCAGC GGAACAAAGC TGGTCACTCT CGCCATTAAC GTTGCCGCAC CCGCTCGTTC GTGTACTGGT GGCAGAGAGT CTGTATCGTG CATGGAGCAT TACGACTAAT CACCCTTACC ATCGGGAGTA A
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Protein sequence | MKLQLVAVGT KMPDWVQTGF TDYLRRFPKD MPFELLEIPA GKRGKNADIK RILEREGEQM LAAVGKGNRI VTLDIPGTRW ETPQLAQQLE RWKQDGRDVS LLIGGPEGLA PECKAAAEQS WSLSPLTLPH PLVRVLVAES LYRAWSITTN HPYHRE
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