Gene Pecwa_3067 details

Gene Information

• Locus tag: Pecwa_3067
• ID: 8531474
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 3342764
• End bp: 3343555
• Gene Length: 792 bp
• Protein Length: 263 aa
• Translation table: 11
• GC content: 52%
• Product: DNA-binding transcriptional regulator ModE
• Protein accession: YP_003260417
• Protein GI: 261822311

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGCCG AAATTCTTCT CACCCTGAAA CTCCAACAGC GTTTATTCGC CGACCCGCGG 
CGTATTGAAT TGCTCAAGCA AATTCGTCAT ACCGGTTCAA TCAGCCAGGG GGCCAAACTG 
GCGGGGATTA GCTACAAAAG CGCATGGGAT GCCATCAATG AGATGAACCA ACTGGCCGAG 
CAAACCATCG TCGAGCGTAT GACCGGCGGT AAAGGCGGTG GCGGTGCGCA ACTCACTCGT 
TATGGCGAAC GTCTTCTCCA ATTGTACGAT TTGCTCGCAC AGATTCAGCA AAAAGCCTTT 
GATGTATTAC AGGAAGACGG GTTGCCGTTG GATAGCCTGC TGGCAGCCAT CGCGCGTTTC 
TCGCTGCAAA CCAGCGCACG TAACCAATTT TTTGGAACCG TGCTCGCACG CAGTGAAGAA 
CAGGTACAAC AACATCTGGA TATTTTGCTC GCCGATGGTA AAACAGCGAT CAGCGCACTG 
ATTACGCAGC AAAGCGCCGA GCGTCTGCAA TTACAGAAAG GGAAAGAGGT ACTGGCACTC 
ATTAAAGCAC CGTGGATCGA TGTATACGCT GCCACCTCTA CCGCGCCCGC CGTTGATAAC 
GTCCTACCAG GGCGGATTCA GACCATTCAG CAGGGTGTGG AGAACAGCGA ACTTTTGATT 
ACGCTTAACG GAGGCGAAAC CCTGTGTGCC ATGGTGCCGA ATACCTTGCT TGAGCAACAA 
AAACTACAGC AGGGAACGGA CGTAAAAGCC TGTTTTAATG CCGACCGGGT CATCATCGCC 
ACGCTTTGTT AA 

 

Protein sequence

MQAEILLTLK LQQRLFADPR RIELLKQIRH TGSISQGAKL AGISYKSAWD AINEMNQLAE 
QTIVERMTGG KGGGGAQLTR YGERLLQLYD LLAQIQQKAF DVLQEDGLPL DSLLAAIARF 
SLQTSARNQF FGTVLARSEE QVQQHLDILL ADGKTAISAL ITQQSAERLQ LQKGKEVLAL 
IKAPWIDVYA ATSTAPAVDN VLPGRIQTIQ QGVENSELLI TLNGGETLCA MVPNTLLEQQ 
KLQQGTDVKA CFNADRVIIA TLC