Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3061 |
Symbol | |
ID | 8531468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 3337589 |
End bp | 3338569 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003260411 |
Protein GI | 261822305 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGATTC AAAAAATAGC ACGGATAGCT GGAGTCTCGG TTGCCACCGT TTCACGGGTG TTGAACAACA TTGGTACCGT GAAGCCGCAA AACCGGGAAC GTGTTCTCAA TGCGATAAAA AGCAGCAATT ATCAGCCGAA CTTACTGGCC CGCCAGCTAC GTACCGCGCG CAGCCAGATG TTATTGGTCA TGGTTTCCAA CATTGCCAAC CCTTTCTGCG CCGATGTGGT GAAAGGCATT GAGGCGGAAG CGGAAGAAAA CGGCTACCGC ATTCTGCTGT GCAATTCAGG TGCCGATATC GTTCGCGCCC ACTCCAGCCT GCAACTGCTG TCCGGTAAAA TGGTCGATGG TGTGATCACC ATGGACGCTA TTTCGACGCT TTCTGCGCTT CAGGACATGA TTGGCAACGC ACCTTGGGTG CAGTGCGCCG AGCATGACGA TACGTCTGCC ATTTCATCCG TCGGTATTGA TAACGCAGAG GCATCCCGTT TTGTGATTAA TCACTTTATT GGCAAAGGCC GCCGCCGTAT CGCCATGATT AACCACGATA TGAATTACCT CTACGCCCAG CAGCGAGAAA AAGGTTATCG CGACGCGCTC GCGGAGAATG CGTTTGATTA TGACAGGGTA GAATACGCCA ACGCGTTGAG CTACCAAGGT GGAAAAGCGG CAATGAACGA GCTACTTAGC GCCCCAGATA GGCCGGATGC CGTCTTTGTG GTGTCCGATA CGCTGGCCGC AGGCGCATTG TCGGCAATCT GCGAGGCGGG GCTGAGTGCG CCACAGGATA TTGCCGTCAT CGGTTTCGAC GGCTCGGAGC TGGGTTACAT CACTTCCCCC CAGCTCAGCA CCATTCAGCA GCCGTCTGCA CATATCGGCA GACAAGCCGT GAAGCTGCTA TTGCAACAGA TCGACCAACC TGACAGCGCA ACAGAAAAGC GTTTACTGGA ATGGACGTTT GTCGAACGGG CATCCAGCTA A
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Protein sequence | MSIQKIARIA GVSVATVSRV LNNIGTVKPQ NRERVLNAIK SSNYQPNLLA RQLRTARSQM LLVMVSNIAN PFCADVVKGI EAEAEENGYR ILLCNSGADI VRAHSSLQLL SGKMVDGVIT MDAISTLSAL QDMIGNAPWV QCAEHDDTSA ISSVGIDNAE ASRFVINHFI GKGRRRIAMI NHDMNYLYAQ QREKGYRDAL AENAFDYDRV EYANALSYQG GKAAMNELLS APDRPDAVFV VSDTLAAGAL SAICEAGLSA PQDIAVIGFD GSELGYITSP QLSTIQQPSA HIGRQAVKLL LQQIDQPDSA TEKRLLEWTF VERASS
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