| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2997 |
|---|
| Symbol | |
|---|
| ID | 8531403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 3259241 |
|---|
| End bp | 3260374 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_003260350 |
|---|
| Protein GI | 261822244 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGATG TACGCATTGG GTTAATCGGC ACGGGCTATA TCGGGCGTGC ACATGCCATC
GCCTACGCGC AGGCACCGAC AGTCTTCGCG CTGAAAGGGA ATCTGGTGAA AGCCATGCTA
GCGGAAGTGT CGCCAGAATT GGCGGCTAAA CGAGCGCAGG AATTCGGTTT TCAGCGCTCG
ACGGGAGACT GGCGCGCGCT GGTGGCCGAT CCCGACATTG ATGTGGTGGA TATCTGCGCG
CCGAACTTTC TGCATAAGAC GATGGCGATG GCGGCTATCC AGCACGGCAA GCATGTTTAC
TCGGAAAAAC CGCTGGCGCT GAACGCGCGT GACGCCAGAG AAATGGTCGA TGCTGCGCAG
CGGGCAGGCG TGAAAACGCT GGTGGGTTTC AACTACATGA AGAACCCGAC TTCACAACTG
GCCAAAGAGA TTATCGCCAG CGGCGAAATT GGCGAGGTGG TGCATTTTTA CGGCACGCAC
AATGAGGATT ATCTGGCCGA TCCGAACAAA CCTGCGGACT GGCACTGCTT TAAAGAAACC
GCAGGGCTGG GGGCGTTGGG GGATCTGGCG GCGCACATCG TCAACATGGC GCAGTATCTG
GTGGGTGATA TCGCCAGCGT CTGCGGCGAT CTGCAAACGG TGATTGCGCA GCGCCCGACG
GTATCGGGCA GCAGCGAGCG GGTACAGGTG GAGAATGAAG ATCAGGCGCA CGCGATGGTG
CGGTTTGCCA ACGGCGCGCG CGGCGTGATT GAAACCTCGC GCATTGCTTG CGGACGCAAA
ATGGGCCTCA CCTACGTGGT GACCGGCACC AAAGGCACGC TGAGTTTCAC ACAGGAACGG
ATGGCAGAGT TGAAGCTCTA TCGACATGAC GAACCGGAAA ATCGGCAGGG ATTTAAAACG
CTGCTGACCG GGCCACAACA CCCTGATTAC GCGGCCTTCT GTGCCAGCGC TGGACACGGC
ATTGGATTTA ACGATCAGAA AACGGTGGAA GTACGCGATC TGATCGACGG TATTGCGGCC
GACGTACCTA TGTGGCCGGA TTTCGAAGAG GGCTGGAAAG TCTCACGGGT TCTGGATGCG
ATCGTGCAGT CACACGAAAC GGCGCGCTGG GTGAACGTGG GCGAGGTGGG CTGA
|
|---|
| Protein sequence | MKDVRIGLIG TGYIGRAHAI AYAQAPTVFA LKGNLVKAML AEVSPELAAK RAQEFGFQRS
TGDWRALVAD PDIDVVDICA PNFLHKTMAM AAIQHGKHVY SEKPLALNAR DAREMVDAAQ
RAGVKTLVGF NYMKNPTSQL AKEIIASGEI GEVVHFYGTH NEDYLADPNK PADWHCFKET
AGLGALGDLA AHIVNMAQYL VGDIASVCGD LQTVIAQRPT VSGSSERVQV ENEDQAHAMV
RFANGARGVI ETSRIACGRK MGLTYVVTGT KGTLSFTQER MAELKLYRHD EPENRQGFKT
LLTGPQHPDY AAFCASAGHG IGFNDQKTVE VRDLIDGIAA DVPMWPDFEE GWKVSRVLDA
IVQSHETARW VNVGEVG
|
|---|
| |