Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2947 |
Symbol | |
ID | 8531353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 3209314 |
End bp | 3210021 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | protein of unknown function UPF0005 |
Protein accession | YP_003260303 |
Protein GI | 261822197 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAGAT ATCCACGCTC GGGTTCAATC GTTGAACGCT CGCAGTCTGG TCTCCAGGCC TATATGGCAC AGGTTTATGG CTGGATGGGC TGCGGCCTGC TGCTGACGGC GTTCGTCTCC TGGTATGCGG CGCATACGCC AGCCGTGTTT GATTTTGTTT TCTCCAGCCG GGTTACGTTC TTCGGACTGA TCATTGCCCA ACTGGGGCTG GTCTTTGTCA TTTCTGGCAT GGTGCAACGC CTGAGTGGTG CGGTTGCCAC GTCGCTGTTT ATGCTCTATT CCGCGCTTAC GGGACTGACG CTATCCAGCA TTTTCGCGGT TTACTCTACT GAGTCTATCG CCAGCACCTT TGTCATTACG GCGGGGATGT TCGGGGCGAT GAGCCTGTAC GGCTATACGA CGAAGCGTGA TTTAAGCGGC TTTGGTAGTA TGCTGTTTAT GGCGCTGATC GGGATTATTC TGGCCTCGCT GGTGAATCTG TGGCTGAAAA GCGAAGCGCT GATGTGGGCA GTGACTTATA TCGGTGTGGT GGTGTTTGTC GGTCTGACCG CATATGACAC CCAGAAGCTG AAAAACATTG GCGAACAGTT GTCCGTTGAT GATAAAGACA GCTTCCGTAA ATACGCCATC GTGGGTGCGT TGACCCTGTA CCTCGATTTC ATCAACCTGT TCCTGATGCT GCTGCGTATT TTCGGTAATC GTCGTTAA
|
Protein sequence | MDRYPRSGSI VERSQSGLQA YMAQVYGWMG CGLLLTAFVS WYAAHTPAVF DFVFSSRVTF FGLIIAQLGL VFVISGMVQR LSGAVATSLF MLYSALTGLT LSSIFAVYST ESIASTFVIT AGMFGAMSLY GYTTKRDLSG FGSMLFMALI GIILASLVNL WLKSEALMWA VTYIGVVVFV GLTAYDTQKL KNIGEQLSVD DKDSFRKYAI VGALTLYLDF INLFLMLLRI FGNRR
|
| |