Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2941 |
Symbol | |
ID | 8531347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 3201367 |
End bp | 3203472 |
Gene Length | 2106 bp |
Protein Length | 701 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | TonB-dependent receptor |
Protein accession | YP_003260297 |
Protein GI | 261822191 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.80569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCACTT TACTTGCATT GATGCCATGC GTGCTGATTG CTCCGGCGTA TGCACAGGAT GACACGACCA AAAAGGATGA GACGAGCGGT GATGAGATGG TGATTACCGC CTCACGCTCG AATATCCAGC AGCAGAAAGC GCCGCAGGTG GTCACGGTGA TTACCAAAGA GCAAATCGAG CAGCAGATGC AGGTCACCTC CGACTCGTCA CAAATTCTGA GCAATCTGTT GCCTTCGTTT GCTCCCAGCC GCCAGAAGAT GAGCGGCAGC GGTGAAACCT TCCGTGGCCG CGCTGCGTTG GTGATGATTG ACGGCATTCC TCAATCCAAT CCCTTGCGCC CCACCGGACG TGAGATGCAT ACCATCGACT ACTCGATGGT CGAGCGTATT GAAGTGATTC ACGGTGCAAA CGCCACCAAC GGTATGGGGG CGATCGGTGG GGTAATTAAC ATTATCACGC GTCGACCGGA AAATGGCTCA TTTAATCAGC ACGTCAACGT GCAAACCACG ATCCCGACGG AAAAGATTCG CGGTGAGACC GCCAGCTATA AAACCACCTA TCGGGTCGAT GGGCGTGAAG ACTATCTCGA TTACCTGTTC GCGATTGGCT ATGAGAATCA GGGGCTGTAT CTGGACGGCA ACAATCGGCC TGTCGGTGTG GATAATACCC AGGGCGATAC CATGGATTCC CGCGCTTACG ACTTATTAGC AAAAGTCGGC TACTGGCTGG ATGACTATCA GCGCATTCAA CTGAGCGTGA ACCGCTATAA CATTAAAAAT GAGAATAACT ACCTCAGCGT GGATGGTATC CGTAGCCAGG GGATCCCGAC GACGTCAGTA CGGGGTACAC CACGGGGTGA AGCACCCCAT AACAGCATAT GGACGACCGG CTTTACTTAC GAAAACCATG ATCTTGCAGG AATGAAACTG TCGGCTCTGC TTTTTAACCA GCGCTATGAA GCATTATTTG GTGCGACGAA TTCATCTTCT TTTCAGGATA CGTCGATTGC TCCAGACAAA ACGCTTTACG ATCAATCTCG CTCAGTAGCC AATAAGTACG GCACCAAGCT GGCGCTGACC AAGGACGATT TACTGGACGA CACCCTGAAA GTCACGGTCG GTTTCGATAC CCTGTACGAT AAAGGGAAAC AGGATCTTTA TCTGACCAAG CGCACCTACG TACCAAAAAT GGAGTACACC AACTATTCAC CATTTATTCA GAGTGAATAC CAACTACTGG ATGATTTAGT ACTGCATGCG GGTGTGCGTC ATGAGAGCGC GAAACTTGAA GTAGATAGTT TTCAGGCGCT GGCTGCGAAT AATGGTGTAT TTGTTGAGGG TGGGTCACTA ACGTTCAATG AGACATTGTA TAACGTTGGT GCGGTTTATT CGGTTACCAA CTCGCTAGAT GTGTTTGCCA GTTATTCAGA AGGTTTTGGG ATGCCGGAAG TGGGGAGAGT GCTACGAGAC GTGAAAACTC CTAACATTAG GCTAAGTAAT TTTAATAACC TGAAGCCTAT TGTCACCGAT AACGTAGAAA CAGGGTTTCG CTTTAAAAAG GATCGATTCG ATTTTGAAGC CAGCTACTAC CAGTCCAACA GTAAACTAGG CGATCGTGTA GCGCAGCAGG GCGATACTTT TGTCTCTAAG CGTGAGAGAA CGCGTATTCA AGGTATCGAA GTGACCGCAG GTTACCAGAT TAACGACCAA CATAAGATTA ATGCCTCTTA CGCCCACAGT GAGGGGAAAT ATGACAGCAA CGGTGACGGT AAGCTGGATA AGAGGCTCAA TGGCCTGAAT ATTGCACCTG ATCGCTTGAT TACCAGTTGG TCCGCGAACT GGAACGACCA ATGGAGTTCG TTCGTGCAGG CGAATTATGC CTTTGGCCGC AGTTTTGACG ATGCGGGTAT GGCGTTTGAT GGTTACCTGT TGATGGATGC TGCCGTGGGT TACAAGCTGC CGTATGGTCG CCTCAACGTG GCGGTGGCGA ACCTGCTGGA TAAACAGTAC ATCACCTACT ATTCGCAGGC GGGGCTTGTT AACGATACGC GCTATTTCTC CGGGCGCGGC CGCACGGTAA CGCTGGGCTA TTCGATTGAT TTCTAA
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Protein sequence | MRTLLALMPC VLIAPAYAQD DTTKKDETSG DEMVITASRS NIQQQKAPQV VTVITKEQIE QQMQVTSDSS QILSNLLPSF APSRQKMSGS GETFRGRAAL VMIDGIPQSN PLRPTGREMH TIDYSMVERI EVIHGANATN GMGAIGGVIN IITRRPENGS FNQHVNVQTT IPTEKIRGET ASYKTTYRVD GREDYLDYLF AIGYENQGLY LDGNNRPVGV DNTQGDTMDS RAYDLLAKVG YWLDDYQRIQ LSVNRYNIKN ENNYLSVDGI RSQGIPTTSV RGTPRGEAPH NSIWTTGFTY ENHDLAGMKL SALLFNQRYE ALFGATNSSS FQDTSIAPDK TLYDQSRSVA NKYGTKLALT KDDLLDDTLK VTVGFDTLYD KGKQDLYLTK RTYVPKMEYT NYSPFIQSEY QLLDDLVLHA GVRHESAKLE VDSFQALAAN NGVFVEGGSL TFNETLYNVG AVYSVTNSLD VFASYSEGFG MPEVGRVLRD VKTPNIRLSN FNNLKPIVTD NVETGFRFKK DRFDFEASYY QSNSKLGDRV AQQGDTFVSK RERTRIQGIE VTAGYQINDQ HKINASYAHS EGKYDSNGDG KLDKRLNGLN IAPDRLITSW SANWNDQWSS FVQANYAFGR SFDDAGMAFD GYLLMDAAVG YKLPYGRLNV AVANLLDKQY ITYYSQAGLV NDTRYFSGRG RTVTLGYSID F
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