| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2906 |
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| Symbol | |
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| ID | 8531312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 3160989 |
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| End bp | 3162317 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | type I secretion membrane fusion protein, HlyD family |
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| Protein accession | YP_003260263 |
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| Protein GI | 261822157 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCAT TTGAATTAAG CGAAGAGAAT ATGAACCAGA CGGCGCGGCG CGATGAAAAA
CGTGCGGTAC GCCTGGGGTG GCTACTGGTG CTTGCTGGGT TCGGCAGTTT TCTCCTGTGG
GCGCTGTTTG CACCGTTGGA TAAGGGCGTC ATGGTGAATG GCAGCGTCGT GATTTCCGGT
AATCGCAAGG TTGTACAGCA CAATCAGGGC GGCATTGTCG ATAAAATTCA GGTGAAAGAC
GGCGACAGCG TTGAGGCTGG GCAGATCCTA CTAACGCTGA ATGAGGTTGA TGCGCGTTCG
GCGAGTGAAG GGCTGGATGG TCAGTATTTA CAACTGGTGG CGCGGGAAGG TCGGTTGCTT
GCTGAGCAGC AGCGCCTGAA TGACATGGTG ATGACGCCAC GTCTGCAACC GATAGCGGAA
AGGCCTGAGG TGAGCGTAAT TACGGCATTG CAGCGCGATT TATTGCACAG TCGTCAGCAG
TCGCTCAAGC TTGAAGCTGA GGGGATGCGT ACCAGTATCG CGGGCATGGA GGCGTCGCTC
AGTGCCCAGC GTCAGGTGAT GTTCAGTAAG CAGAAACAGC GCGGAACGTT GGAACAACAG
TTGGAAGGGT TACGTTCACT AGCAGCAGAG AACTACGTAC CGCGCAATAA AATGCTGGAG
AATGAGCGTC TGCTGGCGCA GCTTAACGGT GATATCGCGC AACTGGCGGG AGATATTAAT
CGCACCCGCC ATGATATTGA GCAGCAAACG CTGCTGATCG CCCAGCGCCA GCAGGAGTAC
GACAAAGAGG TAAACAGCGA GCTGGCAGAG GTGCAGGCGT TGTTGAGCGA TGTGGGTAGC
AAGAAAGAGA AGGCTGATTT CAATCTGGCG AATATACAGA TACGTGCGCC AGTTTCCGGT
ACGGTGGTCG GGTTGAAAGT GTTTACGGAA GGCGGTGTGA TTGCTCCGGG GCAGACGCTT
CTGGAGATCG TACCGGACGA CCAGCCTTTG CGAGTGGATG CGCACCTTCC CGTTGAATTG
GTCGATAAAG TCTGGCCGGG GCTACCCGTT GAGCTTCAGT TTGTAGCGTT TAATCAAAGC
ACGACGCCGC GCGTGGCGGG GACCGTCGAA CTGCTGTCCG CCGATCGCCT GCTTGATGAG
CGGGACGGTT CTCCCTATTA CAGCCTACGA GTGATGGTGG ATGATGAGGG GAAGCGTGCG
CTGGAAGGGT TGGAGATTAA ACCCGGTATG CCGGTACAAG GGTTCGTCCG TACCGGAGAA
CGGTCGTTCG TCAATTATCT CTTTAAGCCT TTAATGGATC GCCTGCATCT GGCATTAACG
GAAGAGTAA
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| Protein sequence | MSAFELSEEN MNQTARRDEK RAVRLGWLLV LAGFGSFLLW ALFAPLDKGV MVNGSVVISG
NRKVVQHNQG GIVDKIQVKD GDSVEAGQIL LTLNEVDARS ASEGLDGQYL QLVAREGRLL
AEQQRLNDMV MTPRLQPIAE RPEVSVITAL QRDLLHSRQQ SLKLEAEGMR TSIAGMEASL
SAQRQVMFSK QKQRGTLEQQ LEGLRSLAAE NYVPRNKMLE NERLLAQLNG DIAQLAGDIN
RTRHDIEQQT LLIAQRQQEY DKEVNSELAE VQALLSDVGS KKEKADFNLA NIQIRAPVSG
TVVGLKVFTE GGVIAPGQTL LEIVPDDQPL RVDAHLPVEL VDKVWPGLPV ELQFVAFNQS
TTPRVAGTVE LLSADRLLDE RDGSPYYSLR VMVDDEGKRA LEGLEIKPGM PVQGFVRTGE
RSFVNYLFKP LMDRLHLALT EE
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