Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2858 |
Symbol | |
ID | 8531263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 3119351 |
End bp | 3120436 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | outer membrane protein A |
Protein accession | YP_003260217 |
Protein GI | 261822111 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000165079 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAA CAGCTATCGC AGTTGCAGTG GCACTGGCTA GCTTCGCGAC CATCGCGCAA GCAGCTCCTA AAGACAATAC CTGGTACACC GGTGGTAAAC TGGGCGTGTC TCAATTCCAC GATACTGGTT TCTACGGCAA TGGTTACACT GGTGTCGTTA ACAACCCAAT CAAAAGCAAG TTAGGTGCGG GTGCGTTTGT TGGTTATCAA GCAAACCCAT ATCTGGGTTT TGAACTGGGC TACGATTGGT TAGGCCGCAT GAAATATGCT GGTTCTGATA CTAATGCAGC AGACAGTGCT AGCTTCAAAG CGCAAGGCAT CCAACTGGCT ACTAAACTGA GCTACCCAGT GATGCCGGAC CTAGACGTTT ACACCCGTCT GGGCGGTTTG GTATGGCGCA CTGACAGCCA CGCAGACAGA AGCGGTACTC ATCTCAACAA CAACGACACT GGCGTTTCTC CGCTGGCTGC TGTTGGTATT GAATACGCTA TCGACAAAAA CTGGGCTACA CGTGTTGACT ACCAGTGGGT AAGCAACATT GGTGACGCTG GTACCGTTGG TGCCCGTCCA GACAACCTGC TGATGAGCGT TGGCCTGTCT TACCGTTTCG GCCAAGATGA CCGTGTTGCC CCTGTTGTTG CTCCAGCTCC AACCCCGGCA CCAGCTCCAG TTGTTGAAAC CAAGCGTTTC ACCCTGAAAT CTGACGTCCT GTTCAACTTC AACAAAGCAA CGCTGAAAGC AGAAGGCCAG CAATCACTGG ATCAACTGTA CACTCAACTG AGCTCTCTGG ATCCGAAAGA CGGTTCCGTT GTTGTTCTGG GCTTCACTGA CCGTTTAGGT TCAGAGCAAT ACAACCAAGC TCTGTCTGAA AAACGTGCAC AGAGCGTAGT GGATTACCTG GTTTCTAAAG GTATCCCTGC GAATAAAGTC TCTGCTCGTG GCTTGGGTAA ATCTCAACCA GTTACTGGTT CTACCTGTGA CAACGTGAAA CCTCGTGCTG CGCTGATTGA CTGCCTGGCA CCGGATCGTC GCGTAGAGAT CGAAGTTAAA GGCATCAAAG ACGTTGTAAC TCAGCCTCAG GCTTAA
|
Protein sequence | MKKTAIAVAV ALASFATIAQ AAPKDNTWYT GGKLGVSQFH DTGFYGNGYT GVVNNPIKSK LGAGAFVGYQ ANPYLGFELG YDWLGRMKYA GSDTNAADSA SFKAQGIQLA TKLSYPVMPD LDVYTRLGGL VWRTDSHADR SGTHLNNNDT GVSPLAAVGI EYAIDKNWAT RVDYQWVSNI GDAGTVGARP DNLLMSVGLS YRFGQDDRVA PVVAPAPTPA PAPVVETKRF TLKSDVLFNF NKATLKAEGQ QSLDQLYTQL SSLDPKDGSV VVLGFTDRLG SEQYNQALSE KRAQSVVDYL VSKGIPANKV SARGLGKSQP VTGSTCDNVK PRAALIDCLA PDRRVEIEVK GIKDVVTQPQ A
|
| |