| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2846 |
|---|
| Symbol | |
|---|
| ID | 8531251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 3108957 |
|---|
| End bp | 3109616 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003260205 |
|---|
| Protein GI | 261822099 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0018864 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGCA TTGTTGTTTC TTCTACCCGT GAAAGTTCGT TACTCAGTAC TCACAAAGTG
CTGCGCAACA CCTATTTCCT GCTGTCGCTG ACGCTGGGTT TTTCAGCCGT TACTGCAACG
GCAAGTACCG TACTTAACCT GCCCGCACCG GGTTTAATTC TGATGCTAGT TGGGTTTTAT
GGTCTGATGT TCCTGACACA TAAATTAGCG AACAGCCCTG CTGGTATTTT GGCTGCATTC
GCACTGACTG GATTTATGGG CTATACACTA GGCCCAATCT TAAACTCGCT GATTTCTTCT
GGCGCAGGTG ACATTGTCAT GCTGGCGCTT GGCGGTACGG CTCTGGTGTT CTTCTCCTGT
TCAGCCTATG TCTTAACAAC GCGTAAGGAT ATGTCCTTCC TGTCTGGCAT GATGATGGCA
GGGTTTGTTG TTCTGATTGT TGCCGTTATT GCGAATCTGT TCTTACAGAT CCCGGCATTG
CATTTGGCAA TCAGCGCCCT GTTTATCCTG TTCTCTGCAG GGGCCATTCT GTGGGAGACC
AGCAACATCA TCCACGGCGG CGAAACTAAC TACATCCGTG CAACAGTTAG CCTGTATGTC
GCGATATACA ATATCTTCGT TAGTCTGTTA AGCATCTTGG GCATCATGCG TAACGATTAA
|
|---|
| Protein sequence | MDRIVVSSTR ESSLLSTHKV LRNTYFLLSL TLGFSAVTAT ASTVLNLPAP GLILMLVGFY
GLMFLTHKLA NSPAGILAAF ALTGFMGYTL GPILNSLISS GAGDIVMLAL GGTALVFFSC
SAYVLTTRKD MSFLSGMMMA GFVVLIVAVI ANLFLQIPAL HLAISALFIL FSAGAILWET
SNIIHGGETN YIRATVSLYV AIYNIFVSLL SILGIMRND
|
|---|
| |