| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2770 |
|---|
| Symbol | |
|---|
| ID | 8531174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 3033601 |
|---|
| End bp | 3034596 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_003260130 |
|---|
| Protein GI | 261822024 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGA AAAGACCAGG TTTACAAGAT GTGGCCAACT GTGTAGGCGT CACTAAAATG
ACGATTAGCC GCTATTTACG CGATCCGCAG AAGGTATCGG CGACGCTACG CGATAGAATT
GCCGCTGCGC TGGATGAATT GGGGTACATA CCCAACCGGG CACCGGAGAT TTTATCGAAT
GCCACTAGCC GAGCGATTGG CGTTCTGCTT CCTTCATTGA CCAATCAGGT GTTTGCTGAA
GTATTGCGCG GCATTGAGCG CGTGACGGAT GCGCATGGCT ACCAGACGAT GCTGGCGCAC
TATGGCTACC ACGCCGAGCG TGAAGAGATG CGCTTGACGT CACTGCTTTC CTACAACATT
GATGGACTGA TCCTTTCTGA GCGTTCTCAT ACGGAACGCA CGCGCAAGAT GATTGAAGTG
GCCGGCATTC CGGTGATTGA AATCATGGAC AGCGAGTCCC CCTGTATCGA TCTGGCCGTG
GGTTTTAACA ATTTTGAAGC CGCCTACCAG ATGACTCAGG TACTGCTGGC GCGTGGGCAC
CGTTTTCCGG TTTATCTCGG CTCGCGTCTG GATGAACGTA CTCTGATTAA AATGCAAGGG
TATGAACAGG CGATGCGTGA GGCTGGGCTG GTGCCGCGTG ATGTCAGCAC CGATCGCCCC
TCGTCTTACA GTCTGGGTGG CGAACTGATG AAAGAAGCGC TTGAGCGTTA TCCGGAAACC
GACAGCCTGT TTTGCACCAA CGATGATATC GCCATTGGTG CCGCCTTCGA GTGCCAACGG
CAAGGGTTAC ACATCCCCGA TAAAATGGCG ATCGCGGGCT TTCACGGACA CGATATTGGC
CAGTCGATGG AACCTAAGCT GGCCAGCGTG TTGACGCCGC GTGAAAGAAT GGGGCAGGTG
GCGGCAGAGC GACTGTTGTC CCGGTTGCGC GGGGAAATTG TTACCCCGCA ACGATTGGAC
TTGGGCTTCA CCATCCTGCA CGGCGGCAGT ATTTGA
|
|---|
| Protein sequence | MKKKRPGLQD VANCVGVTKM TISRYLRDPQ KVSATLRDRI AAALDELGYI PNRAPEILSN
ATSRAIGVLL PSLTNQVFAE VLRGIERVTD AHGYQTMLAH YGYHAEREEM RLTSLLSYNI
DGLILSERSH TERTRKMIEV AGIPVIEIMD SESPCIDLAV GFNNFEAAYQ MTQVLLARGH
RFPVYLGSRL DERTLIKMQG YEQAMREAGL VPRDVSTDRP SSYSLGGELM KEALERYPET
DSLFCTNDDI AIGAAFECQR QGLHIPDKMA IAGFHGHDIG QSMEPKLASV LTPRERMGQV
AAERLLSRLR GEIVTPQRLD LGFTILHGGS I
|
|---|
| |