Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2662 |
Symbol | |
ID | 8531063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2913835 |
End bp | 2914518 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | pyridoxamine 5'-phosphate oxidase |
Protein accession | YP_003260025 |
Protein GI | 261821919 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0604494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACACAGG AACGCTCCCC CTCTGACGCT ACTCCGCTTC TTCACCTCAA CGATATCGCT GACATCCGCC GCGAATACAC GCGAGGCGGA CTGCGTCGTG GCGATCTCCC TGCTAATCCG CTGGATTTAT TTGAACGCTG GCTGAAACAG GCGTGTGAGG CGAAACTGGC CGATCCTACT GCGATGTCTG TCGCGACCGT TGATGAACAC GGGCAGCCCT ATCAGCGTAT CGTTTTGCTT AAACACTATG ATGAGAAAGG CATGGTGTTT TACACCAACA TGGGCAGCCG CAAAGCGCAT CATCTGGAAA ACAACCCACG TATCAGCCTG CTGTTCCCTT GGCATATGCT GGAACGGCAG GTGATGGTGT TGGGGCGCGT AGAGAAATTG CCGACGCTTG AGGTGTTGAA ATATTTCCAT AGCCGTCCGA AAGACAGCCA GATTGGTGCG TGGGTATCAA AACAGTCTAG CCGGATTTCG GCGCGCGGCG TGTTGGAAAG CAAATTTTTG GAATTGAAGC AAAAGTTCCA AAGTGGTGAC GTCCCTTTAC CGAGTTTTTG GGGAGGCTTC CGCGTCGTCA TCGATTCTGT CGAATTCTGG CAGGGCGGTG AACACCGCTT GCATGACCGA TTTTTCTACC AGCGACAGGG AGAGAGCTGG CAGATTGATC GTTTAGCGCC TTAA
|
Protein sequence | MTQERSPSDA TPLLHLNDIA DIRREYTRGG LRRGDLPANP LDLFERWLKQ ACEAKLADPT AMSVATVDEH GQPYQRIVLL KHYDEKGMVF YTNMGSRKAH HLENNPRISL LFPWHMLERQ VMVLGRVEKL PTLEVLKYFH SRPKDSQIGA WVSKQSSRIS ARGVLESKFL ELKQKFQSGD VPLPSFWGGF RVVIDSVEFW QGGEHRLHDR FFYQRQGESW QIDRLAP
|
| |