| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2551 |
|---|
| Symbol | |
|---|
| ID | 8530952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 2782851 |
|---|
| End bp | 2784050 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1501 |
|---|
| Protein accession | YP_003259918 |
|---|
| Protein GI | 261821812 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.201136 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCAC CGTTTACATT GTCACGGCGC TTGCTCCTCG GCGGGCTTGG CGCGGGCCTA
TTAACCGCCA TGCTTCCCCT GCCCGGCGTT GCCAAGAACG CCATTCCCGC AAACAAGCAT
TTGATCGTCA TCGAATTATT TGGGGGGAAT GATGCGTTAA ACACGCTGGT TCCCTACCGG
GATCCACTCT ATCGACATTA TCGCCCGACA CTGGCGTTAA ACGCCCACGA ATATGCACCG
TTAAGTGATG ATCTGGCCTT TAATATCGCC TGGAAAAAGC TCGCTCATGT CTTTCAAAAG
GGAGAATTAG CGGTAATACA AGATGTTGGC TATCCCTCTC CCAATCTGTC TCATTTCAGT
TCCGCCGCAA TCTGGGCCAA TGGTGCTGAC ACCCCGACGC TGAAGTCAGG CTGGGCTGGC
CGCGTTCTGA GCGCCTCTTC ACGTGAGGAC CGATATCATG ATACTGACGG CATTATTCTT
TCTGGCGATC AGTCTTTACT CATCCATCCG GCGATCCAGG CACTGACGTT TCAGGATAGT
CGCGCTCTAC TTAATGCCGA TTTCACCCTA CCCTCAGCCC AAACGAGGGG GAGAAGCACA
ACGGCAGCAC AGCATATCCA CCGGCTAATG GAGAGTACCA ACACGATAAG TCGACGGATT
CAAAATAAGC TGCACAATCA GAACCATTTC ACCCGTCGAT TTACACAGGA CGGCTACATT
GAACCGCAAA ACGCGCAAGC GGCAACGATA CTCTGGCTGA TAGAGAACAA TGTCCGTTCC
CCTTTGTACA AAATCAGTTT GTCTGGCTTC GATTTGCACA GTCATTTGCG CGGTGAACAT
GAGCGCCAAC TCAGTAAAGT AGAGACGCTA CTGCTTGGGC TACGGCAAGG ACTCATCGAT
ATTGGAGCCT GGCAGGACAG CCTCATTATG GTGCATTCAG AGTTCGGCCG TCGGCCAAAA
GAGAATGCAT CGGGTGGAGC CGATCACGGC ACGTGCGGGC CGATGCTGCT AGTAGGTGGT
CAGGTTGAAG GAGGTATCTG GGGAGATCGC AGTCCACTCG ACAAGCTGGA TAATGATGGT
AATCCACTAT TTTCTACCGA TTTTCGTTCG GTATACGCCA CCGTCGCTGA ACGTTTTTGG
CGACTTCCTG CCGCTCACAT TGACGGAACA TCGCTCTCTC CTCTGAATAT TCATCTTTAA
|
|---|
| Protein sequence | MSAPFTLSRR LLLGGLGAGL LTAMLPLPGV AKNAIPANKH LIVIELFGGN DALNTLVPYR
DPLYRHYRPT LALNAHEYAP LSDDLAFNIA WKKLAHVFQK GELAVIQDVG YPSPNLSHFS
SAAIWANGAD TPTLKSGWAG RVLSASSRED RYHDTDGIIL SGDQSLLIHP AIQALTFQDS
RALLNADFTL PSAQTRGRST TAAQHIHRLM ESTNTISRRI QNKLHNQNHF TRRFTQDGYI
EPQNAQAATI LWLIENNVRS PLYKISLSGF DLHSHLRGEH ERQLSKVETL LLGLRQGLID
IGAWQDSLIM VHSEFGRRPK ENASGGADHG TCGPMLLVGG QVEGGIWGDR SPLDKLDNDG
NPLFSTDFRS VYATVAERFW RLPAAHIDGT SLSPLNIHL
|
|---|
| |