| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2523 |
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| Symbol | |
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| ID | 8530924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 2749017 |
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| End bp | 2750681 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | Polypeptide-transport-associated domain protein ShlB-type |
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| Protein accession | YP_003259890 |
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| Protein GI | 261821784 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGGTT TTTTCGGGCT GGTATTTATC ACGCCTGTAT TTTTTTCTTA TGCAGTATTT
TCCGCTCCGC TTAATCCGGT GGACAGAAAT GACATTCAAC AGCGACAGGC CGAGGTGATC
GACCAATCCC GACAGCAGCG TGATTCCTTA TTGCAGTTAA ATCAGCCACA AGCGACGGTA
AACCCAGGCG GCGTAAGCGA TGCCGGGCAA TGCTTTTCCA TTAAAGACAT TCATTATCGC
AACAGTTCTC TGTTGCATGA AAACGATAAA AATAAGTTAA ATAAAAATTA CATTAATCGT
TGCATTAATG TTAGCAATAT AAATCAACTG ATTCATGACA TCAGTAATTG GTATATCGAA
CGGGGATATA TTACCAGTCG GGCGTTTATT TCTGAGCAAG ATCTCTCGGG CGAAATATTA
CAGATCGATA TTCTGGAAGG TCGCCTCGAA TCTATTAAGA TGAATAATCA ATCGACGCGA
GCCTTAAAGC AGGTCTTTCC GGGGTTGGAA GGTGAAATCC TCAATCTTCG AGATATCGAA
CAAGGCATGG AGCAGCTTAA CCGCATGCCG ACGCAGCAGG TGAGCATCGA AATTCAGCCC
GGCAACCAGC CCGGTTATTC CATTGTGAAT CTCACCAGTA AAAAGCAGAT TCCGCTGACG
GCAAACATCA GTTTCGATAA TAGCGGGCAG AAAAGTACTG GGGAGCAACA GCTAAACGGC
GGCCTGTGGG CGGATAACGT GCTGGGGTTG GCCGACCAAT GGTTTATCAA CAGCGGGCAC
AGCAGTGAAT TTCGGGATAG CCGCAACGCC GAAAGCCTAC AGACGGGGGT GTCGCTGCCT
TATGGCTACT GGACGCTCAG CTACGATTAT TCTAAAAGCC GTTATCGCAA CGATTTCACC
AACCAGGATT TTCTCTGGCA TTCAACGGGC GACAGTCAGA CGCATCGCGC CACGCTGTCA
CACGTGGTGT TTCGCAATGG TGATATGAAA ACCAGCCTCT CGGCAGGCAT GTCGCACCGT
ATTGGGCAGA ACTACCTGAA CGATGTTCTG CTGCAATCCA GTAGCCGTAA ACTCAGCAGC
GCAATTATCG GCATCAATCA CAGCCAGAAA CTGTGGGGCG GGTTGGCGAC GCTCAATCCC
GCTTACAGTC GTGGAACGCG CTGGTTTGGT GCCGAAAGTG ACGTTGGTAA ATCCGACCAT
GCGCCTCGCG CTGAATTTAA CAAGGTGACA CTGGCGGCCA GCTATTACTA CCCTATCGCT
GAAAACCTCC ATTATCTCAC CAACATCTAT GGCCAGTATT CACCACAGCG CCTGTATGGT
AGCGAGCAGG TGACGCTGGG CGGAGAGACC TCCGTGCGTG GTTTTAAAGA GCAGTATCTT
TCAGGTAACC GTGGCGGCTA CTGGCGCAAC GAAGTCAATT GGCAGGTAGC ACAGTTGCCG
CGGCTGGGCA GTGTCACCCT AACGACGGCG CTGGACGGGG GACACCTTTT CTCGCAGCAG
GCAGACCGTG AATCGGCGGG CACGTTATGG GGAGCGGCGG TTGGTGCGGC TATCGCTAAT
CAATATCTCT CACAGCAAAT CACGGTTGGC TGGCCGTTGG CACACCCCGA CTGGTTAAAA
CCGGATCACG CTGTTGCCTA TTACCGCGTT GGACTTTCTT TTTAA
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| Protein sequence | MRGFFGLVFI TPVFFSYAVF SAPLNPVDRN DIQQRQAEVI DQSRQQRDSL LQLNQPQATV
NPGGVSDAGQ CFSIKDIHYR NSSLLHENDK NKLNKNYINR CINVSNINQL IHDISNWYIE
RGYITSRAFI SEQDLSGEIL QIDILEGRLE SIKMNNQSTR ALKQVFPGLE GEILNLRDIE
QGMEQLNRMP TQQVSIEIQP GNQPGYSIVN LTSKKQIPLT ANISFDNSGQ KSTGEQQLNG
GLWADNVLGL ADQWFINSGH SSEFRDSRNA ESLQTGVSLP YGYWTLSYDY SKSRYRNDFT
NQDFLWHSTG DSQTHRATLS HVVFRNGDMK TSLSAGMSHR IGQNYLNDVL LQSSSRKLSS
AIIGINHSQK LWGGLATLNP AYSRGTRWFG AESDVGKSDH APRAEFNKVT LAASYYYPIA
ENLHYLTNIY GQYSPQRLYG SEQVTLGGET SVRGFKEQYL SGNRGGYWRN EVNWQVAQLP
RLGSVTLTTA LDGGHLFSQQ ADRESAGTLW GAAVGAAIAN QYLSQQITVG WPLAHPDWLK
PDHAVAYYRV GLSF
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