| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2460 |
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| Symbol | |
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| ID | 8530861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 2664419 |
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| End bp | 2665918 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | type VI secretion protein, EvpB/VC_A0108 family |
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| Protein accession | YP_003259828 |
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| Protein GI | 261821722 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAGA CTTCACAACC GCAGCAACCG CAGGGCGAAA CCCGTTTTAG TCAGGATGAG
TTCAGCGCGC TGCTGAACAA AGAGTTCCGT CCGAAGAGCG ATCAGGCGCG TGAAGCAGTA
GAGCGCGCGG TGAAAACGTT GGCGCAGCAG GCATTGGAAA ATGCCATTAC CGTATCGAGT
GATGCGTACC GCACCATTCA GGCGCTGATC GCTGAGATCG ATGAAAAGCT GTCGCAGCAG
GTGAATCAGA TCATTCACCA CGATGATTTT CAGACGCTGG AAAGCGCGTG GCGCGGTCTG
AATTATCTGG TGAACAACAC CGAAACTGAC GAGATGCTGA AAATTCGTTT CATGAGCATC
TCCAAGAAGG AGTTGGGCCG TAGCCTGAAA CGTTTCAAAG GGGCGGGGTG GGATCAAAGC
CCGCTGTTCA AAAAAATCTA CGAGCAGGAG TATGGTCAGT TCGGTGGTGA ACCGTTTGGC
TGTCTGGTGG GCGATTATTA CTTCGACCAC AGCCCACAGG ATGTCGAACT GCTGGGTGAA
ATGGCACGCA TCGGTGCGGC CGCACACTGT CCGTTCATCA CCGGTACTGC ACCGGGTGTG
ATGCAGATGG AATCCTGGCA GGAGCTGGCT AACCCACGCG ATCTGACCAA GATTTTCCAA
AACACCGAAT ATGCTGCATG GCGTAGCCTG CGTGAATCGG AAGATGCCCG CTACCTCGGT
ATGATGATGC CGCGTTTCCT CGCGCGTCTG CCTTACGGTA TTCGCACCAA TCCGGTTGAT
AACTTTGATT TTGAAGAGCA GACCGACGGC TCTGACCACA GCAATTATGC ATGGAGCAAT
GCGGCTTACG CGATGGCAGC CAACATCAAC CGCTCGTTTA AAGAATACGG CTGGTGTACC
GCGATTCGCG GCGTGGAATC GGGTGGCGCA GTCGAAAACC TGCCGTGCCA CACTTTCCCA
AGTGATGACG GTGGCGTGGA TATGAAGTGT CCGACCGAAA TCGCCATCAG CGACAGACGC
GAAGCCGAGT TGGCGAAAAA CGGCTTTATG CCGCTGGTGC ATCGTAAAAA CTCTGACTTT
GCCGCCTTTA TCGGTGCACA GTCGCTGCAG AAGCCAACCG AGTATCACGA TGCTGATGCC
AGCGCCAACG CCCGCCTGGC CGCCCGTTTG CCCTATCTGT TCGCCTGCTG CCGCTTCGCG
CATTACCTGA AATGCATTGT GCGCGATAAG ATCGGTTCTT TCCGCGAGCG TGATGAAATG
GAGCGCTGGT TGAACGATTG GGTAATGAAC TACGTTGATG GCGATCCTGC TAACTCCTCG
CAGGAAACCA AATCGCGTAA ACCACTGGCC GCAGCCGAGG TAACCGTAGA GGAGCAGGAA
GATAATCCAG GCTATTACGC AGCGAAATTC TTCCTGCGCC CGCATTACCA GCTAGAAGGC
CTGACGGTTT CGCTGCGCCT AGTATCGAAA CTGCCATCGC TGAAATCGAA TGAAAATTGA
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| Protein sequence | MTQTSQPQQP QGETRFSQDE FSALLNKEFR PKSDQAREAV ERAVKTLAQQ ALENAITVSS
DAYRTIQALI AEIDEKLSQQ VNQIIHHDDF QTLESAWRGL NYLVNNTETD EMLKIRFMSI
SKKELGRSLK RFKGAGWDQS PLFKKIYEQE YGQFGGEPFG CLVGDYYFDH SPQDVELLGE
MARIGAAAHC PFITGTAPGV MQMESWQELA NPRDLTKIFQ NTEYAAWRSL RESEDARYLG
MMMPRFLARL PYGIRTNPVD NFDFEEQTDG SDHSNYAWSN AAYAMAANIN RSFKEYGWCT
AIRGVESGGA VENLPCHTFP SDDGGVDMKC PTEIAISDRR EAELAKNGFM PLVHRKNSDF
AAFIGAQSLQ KPTEYHDADA SANARLAARL PYLFACCRFA HYLKCIVRDK IGSFRERDEM
ERWLNDWVMN YVDGDPANSS QETKSRKPLA AAEVTVEEQE DNPGYYAAKF FLRPHYQLEG
LTVSLRLVSK LPSLKSNEN
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