| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2447 |
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| Symbol | |
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| ID | 8530848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 2647919 |
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| End bp | 2650126 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_003259815 |
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| Protein GI | 261821709 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.764507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCTCAC GCATCACCGC GCAGTTGCCG ATGGACGGCC TGCTGTTCTG GAAACTCTCG
GGCACCGAGA CGTTGTCCCA CTCATTTGTG CTGACCGCCG ACCTGCTTGC CACCGACGCA
CGGATTGACC GACATTCGCT GCTGGGCCAG CCGGTCACGT TCACACTGCC GACGCAGAGC
CTGCTGAGCC CGCGCTACCT CAACGGCAAA ATCACTCGGG TCGCGGTGCG CAGCGAAGAG
CTGAGCGGCA CGCGCTACGC GGTCTACACG CTGACGGTGG AATCGGACCT GTGGCCGATG
CGGCGTGACC GCAATCTGCG CATCTTCCAG AGTCAGACGG TGCCGCAGAT AGTGCAGACG
CTGCTGAAAG AGTACGGGGT GAATGTGGAG ATGCGTTTAT CGGGCAGCTA CCGGGTGTGG
GAGTACTGCG TGCAGTATCA GGAGAGCAGC CTGGATTTCC TCAGCCGACT GATGGAGTTG
GAGGGGATTT ACTACTGGTT CCGCCACGAG CAGGAGCGCC ACACGCTGGT GCTGTGCGAC
GCGACAGACC AGCACAAGGC ATTTCCCGGC TACGAGACGA TGACATATCA CGTGACGCCG
TCGGGTGGCA GCGTGACGGA AGAGGGCATC AGCCAGTGGT CGCTGGCAGA GAGCGTCACG
CCGGGAATGT ACAGCACGGA CGATTACGAT TTTCGCAAGC CAAACGCGTG GATGCTTCAG
GCGCGGCAGA ATCCGGCGTC GCCGACGCCG GGCTCGGTGG ACGTGTACGA CTGGCCGGGT
CATTTTGTGG ACCACAGCCA CGGCGAGTTT TACACGCGTA TCCGTCAGGA GGTGTGGCAG
GTAGAGCACC ACAGCGTGAG TGGGTCGGGT ACGGTGACGG GCATTGCACC GGGGTTTACC
TTTGGTCTCC TTAACGCGCC GCATTTTAGC GACAACGGTG AGTATCTGGT GACATCGGCG
ACGTATGTGT TTGAGGAAAA CAGCTACGCC AGCGGTGATA GCGGAGGCTC GAAGCACAAC
ATTGCGTTCA CGGTGCTGCC CGCGTCGGTA ACGTTCCGGG CGGAGCCGAC GACGGCGTGG
CCGAAGACGC ACGGCCCGCA GACGGCGAAG GTGGTGGGCC CGCAGGGAGA GTCTATCTGG
ACGGACCGGT ACGGCCGGGT GAAGGTAAAG TTCCACTGGG ATCGACTGGC GAAGGGCGAC
GACACCAGCT CGTGCTGGGT ACGTGTATCG AGCGCCTGGG CGGGTCAGGG ATTTGGCGGG
GTGCAGATCC CGCGCGTGGG CGATGAAGTA GTGGTGGACT TCATCAACGG CGACCCGGAC
CGCCCGCTGA TCATCGGCCG GGTGTACAAC GAGGCGAGCA TGCCGCCGTG GAATCTCCCC
GAGGATGCGA CACGTATGGG TTTTATGAGC CGCAGCAAAG ACGGGCATCA TGACAACTCC
AGCTTCCTGT TTTTTGAGGA TAAGTCGGGG GATGAACTGC TCAATATGCA TGCTGAGAAG
GACATGAGCA TCTCAGTGGA GAATGACAAG ACCATCGCCA TTGAAGGTTG TCGCACGACC
ACTATCGGCA AAGAACAGAG CGATAAAGTA ACCGGTGATG CCACATTCCA TTACAAGCAA
AAGCGGACGA CAACGGTTGA TGATGCTGAG ATTAATACAT TTAATAATGG TGAATTTACA
ACTATAAAAA ATGGACGTAC TTTAAAAATA ACAAGCGGTG GAGACGAAAT ATCAATTAAT
GGTGATAAAA AAACTCGAAT TAAAGGTGAT GAAAAACGTG AACTTTCAGG TAGTTTAAAC
GAGGGAGTTG AAGGTGACGT TGTTGTTAAC ATTAATGGTA ACTGGGATCA GACCGTCGTG
TCGGGAAAAA TTAATATTTT TAGCCCTAAT GAGATTTGTA TTAAGAGTGG TAAAAAAGTA
AGCATAGAAG CGCCTTCGAG TTGGGTGAAA ACTGCGCTTC ATTCTTTTTC AATGACTGGA
TTTAATGAAA GTGTTACTGG AAATAGTGTT TCATTTACTG GAAATAGTAT CAGTGGGGCA
GGAGTAAGTT CTTCGTTCAC CACAGTCAGT AATAGCCTTA CCGCCTTAAG TAACTCAAGT
GCGTTGGTTA GTTATTCGAT AAAAACCATT GATAATAGAC GCTCAATCAC TAAAATTGAA
GACTCTCTTC AAAATTTAGT TATTAGTGCA ATACATTTAT TTATATGA
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| Protein sequence | MFSRITAQLP MDGLLFWKLS GTETLSHSFV LTADLLATDA RIDRHSLLGQ PVTFTLPTQS
LLSPRYLNGK ITRVAVRSEE LSGTRYAVYT LTVESDLWPM RRDRNLRIFQ SQTVPQIVQT
LLKEYGVNVE MRLSGSYRVW EYCVQYQESS LDFLSRLMEL EGIYYWFRHE QERHTLVLCD
ATDQHKAFPG YETMTYHVTP SGGSVTEEGI SQWSLAESVT PGMYSTDDYD FRKPNAWMLQ
ARQNPASPTP GSVDVYDWPG HFVDHSHGEF YTRIRQEVWQ VEHHSVSGSG TVTGIAPGFT
FGLLNAPHFS DNGEYLVTSA TYVFEENSYA SGDSGGSKHN IAFTVLPASV TFRAEPTTAW
PKTHGPQTAK VVGPQGESIW TDRYGRVKVK FHWDRLAKGD DTSSCWVRVS SAWAGQGFGG
VQIPRVGDEV VVDFINGDPD RPLIIGRVYN EASMPPWNLP EDATRMGFMS RSKDGHHDNS
SFLFFEDKSG DELLNMHAEK DMSISVENDK TIAIEGCRTT TIGKEQSDKV TGDATFHYKQ
KRTTTVDDAE INTFNNGEFT TIKNGRTLKI TSGGDEISIN GDKKTRIKGD EKRELSGSLN
EGVEGDVVVN INGNWDQTVV SGKINIFSPN EICIKSGKKV SIEAPSSWVK TALHSFSMTG
FNESVTGNSV SFTGNSISGA GVSSSFTTVS NSLTALSNSS ALVSYSIKTI DNRRSITKIE
DSLQNLVISA IHLFI
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