Gene Pecwa_2372 details

Gene Information

• Locus tag: Pecwa_2372
• ID: 8530773
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 2570486
• End bp: 2572459
• Gene Length: 1974 bp
• Protein Length: 657 aa
• Translation table: 11
• GC content: 52%
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_003259749
• Protein GI: 261821643

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.63052
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCACGC AATTAATACA AAAAAAGACA ATGAGCACCC GCGCCCAGGT ATTGTTAACT 
GGCGCATTCA CCATCGCACT CGGTTTCGCT GTCACCATCG GAGTACTCAG TTGGCAATCC 
AGTAGTGAAC AAAAGTCTCT GGCCGAACGC TATTTACAGC AAATAGCCCA AAGTGAAGCT 
CTGAGAATTC AACAGGAACT CAACTACGCC CGTGATGTGG CACATAACCT TGGGCAAGGG 
CTGGTTGCTT TGCCATCCGC AGGCATTAAA GACCGCGCTG TGGTCGATAA AATGATGGAA 
TATGCTCTGC GGGATAACCC AGAGTACCTC TCGGTTTCAG TTATTTTTGA AGAGAATGTG 
TTTGACGGAC GTGACGCCGA GTTTGCCGAT CAACCGGGTC AGGCACCGAA AGGCCGCTAT 
GCCTGGTTTG TTGACCACGA TCAGTCTGGC AATTACACGA TGCATCCTCT GCTTTCTTAC 
CTGACTCCCG GCCAGGGCGA TTACTACCTG TTGCCGCAAA AGAGCCAGAA AGATACGCTA 
ATCGAACCCT ACACCTATGC TTACAACGGC GTTCCAACGC TGCTGACGTC AGTCGCCGCA 
CCGATTGTCA GTCAGGGGAA ACTGTGGGGC GTCGTCACTT CCGACATTTC TCTTGCGTCA 
TTGCAGCAAA AAGTTAACCA GATTAAACCC TGGGAAGGCG GTGGATACGC GATGCTGTTA 
TCCAGCGCGG GTAAAGTCAT TTCTTATCCT GATAAATCCC TGACGAGCAA AGCTTGGCAA 
GGGTCAACGG ACAATTTCAC CTCTTCAGTA GTACAGCACG ATGATGCGAT TCTGGGCGAA 
CAAGCGCTGG TTACCTGGCA ACCGGTTACC ATCGGTAACA GTACGGAGAA GTGGTATCTC 
GGGATTGTTG CGCCAGTGAG TCAGGTGATG GCCGCGTCTG AGCGCCAGTT GATGAACGCG 
GTGATCATGA TGGTGATCAG CATTCTGTTG GTGAGTGCGC TGCTGGGCTG GGTATTCAGT 
CGTAAAGTGC TTAAACCTAT TGGTGGTGAG CCGCTTGAAG CCGCAACTAT CGCGCTGTCT 
GTTGCGGAAG GGAAATTGAG TAATGTGATT GACGTGAAAG CCAACGATCG CAGCAGCCTG 
TTCTTTGCGC TGCATACGAT GCAATCGCAA CTGCGCCAGG TGGTTGGACA AATCAAAGAT 
GCCAGTGATT CCGTGCGGCA AGGCGCAGCG GAAATTGCCA GTGGCAACCT CAATCTTGCC 
TCGCGTACTG AGCAGCAGGC TGCTGCACTT GAGCAAACGG CGGCGAGCAT GGAAGAGATC 
ACTGCCACGG TGAAACACAA TGCCAACAAC GCTCATCAGG CCACGACGCT GACAGAGAAC 
GCCACGAAAA TAGCCCAACG AGGTGAATCG CTGGTTAGCC AGGTGGTGCA GACGATGTCA 
CAGATTGACG ATAGTGCGAA GAAGATTGGC GACATTACCT CCATGATTAA CAGCATCGCT 
TTTCAGACCA ATATTCTGGC GTTGAACGCG GCGGTAGAGG CGGCGCGGGC GGGTGAACAG 
GGCAGAGGAT TCGCCGTCGT GGCATCGGAA GTTCGCAGCC TGGCACAGCG TAGCGCCAGC 
GCGGTGAAAG AGATTGCCTC CCTGATTGAG GAATCCAGCC AGCGTGTTGA AAGCGGCGTT 
AAACTGGTGA ACGATGCGGG TAAAACCATG CAAGATATGA CGCATGCTGT CAGTTCGGTA 
CAAAGTATTA TCGGTGAGAT TGTCACCGCA TCGGACGAAC AGGCGAAAGG CATAAGCCAG 
GTAACGATTG CCGTTAATGA AATGGATGGC GTAACGCAGC AAAACTCCGC ACTGGTACAG 
CAGATGTCTG CCGCAGCCAG TTCACTGGAA GATCAGTCCA TGCTGTTGGC GCAAACGATA 
GAACATTTCC GTCTGGAACA GCAGCACACT TTACCCCATG CGTTATTAAA GTAA 

 

Protein sequence

MATQLIQKKT MSTRAQVLLT GAFTIALGFA VTIGVLSWQS SSEQKSLAER YLQQIAQSEA 
LRIQQELNYA RDVAHNLGQG LVALPSAGIK DRAVVDKMME YALRDNPEYL SVSVIFEENV 
FDGRDAEFAD QPGQAPKGRY AWFVDHDQSG NYTMHPLLSY LTPGQGDYYL LPQKSQKDTL 
IEPYTYAYNG VPTLLTSVAA PIVSQGKLWG VVTSDISLAS LQQKVNQIKP WEGGGYAMLL 
SSAGKVISYP DKSLTSKAWQ GSTDNFTSSV VQHDDAILGE QALVTWQPVT IGNSTEKWYL 
GIVAPVSQVM AASERQLMNA VIMMVISILL VSALLGWVFS RKVLKPIGGE PLEAATIALS 
VAEGKLSNVI DVKANDRSSL FFALHTMQSQ LRQVVGQIKD ASDSVRQGAA EIASGNLNLA 
SRTEQQAAAL EQTAASMEEI TATVKHNANN AHQATTLTEN ATKIAQRGES LVSQVVQTMS 
QIDDSAKKIG DITSMINSIA FQTNILALNA AVEAARAGEQ GRGFAVVASE VRSLAQRSAS 
AVKEIASLIE ESSQRVESGV KLVNDAGKTM QDMTHAVSSV QSIIGEIVTA SDEQAKGISQ 
VTIAVNEMDG VTQQNSALVQ QMSAAASSLE DQSMLLAQTI EHFRLEQQHT LPHALLK