Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2318 |
Symbol | tppB |
ID | 8530719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2513091 |
End bp | 2514611 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | putative tripeptide transporter permease |
Protein accession | YP_003259695 |
Protein GI | 261821589 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTCAACAG CAAACAACAA CAGCGAATCA ACCGAAAGCA TCAGCATGAA CGCTTTCAAA CAACCAAAAG CGTTTTATCT CATCTTTAGC ATCGAGCTGT GGGAGCGTTT TGGTTACTAC GGTCTGCAGG GCATTATGGC GGTTTATCTG GTCAAAATGC TGGGCATGTC CGAAACCGAC TCCATCACCC TATTTTCCTC GTTCAGCGCG TTGGTATACG GTTTCGTCGC CATTGGCGGC TGGTTGGGCG ACAAAGTCCT CGGCACCAAA CGTGTCATCG TGTTAGGAGC CATCGTACTG GCATTCGGCT ACGCCATGAT TTCCTACTCG GGTCATAGCG TGACATGGGT CTATATCGGT ATGGCAACCA TTGCCGTCGG TAACGGGTTG TTTAAGGCTA ATCCGTCAGC TCTGCTGTCT ACCTGCTACG CGAAAGACGA TCCGCGTCTG GATGGTGCCT TCACCATGTA CTACATGGCG GTGAACATCG GCTCTTTCTT TTCTATGTTG GCTACACCGG TGCTCGCCGC AAACTATGGC TGGAGCGTTG CGTTCTCCCT AAGCGTAGTC GGGATGATTC TAACGCTGGT TAACTTCATG TTCTGCCGTA AGTGGGTTAG CACACAAGGT TCTCAGCCAG ATTTCCAGCC GATCAATTTG CAGAAGCTCG CCATCACCCT CGTGGGTATC GTTGCACTGG TCGCGCTCTC CACTTGGCTA TTGCACAATC AGAGCGTAGC TCGTTGGATA CTGACGCTTA TTTCAATCGC CGTTGTCGCC ATTTTCATCA AGGAGATGCT GGCGGTGAAA GGTGCAGAAC GCAGGAAGAT GATCGTAGCA CTTCTGCTGA TGCTGGAAGC CGTGGTCTTC TTTGTGCTGT ACAACCAGAT GCCAACATCG CTGAACTTCT TTGCTATCCG CAACGTTGAG CACTCAATTT TAGGCTTTGC CTTTGAGCCA GAGCAGTATC AAGCGCTCAA CCCATTCTGG ATCATGGTTG CCAGCCCGAT TCTGGCGGCG GTTTACAACA AAATGGGCGA CCAACTGCCG ATGGCACACA AATTTGCGAT TGGTATGGTG CTGTGCTCCG GCGCGTTTCT GGTGCTGCCG TGGGGCGCTA GCATGGCAAA CGAACAAGGT ATCGTGTCCG TCAACTGGCT GATCCTCTGC TATGGCCTGC AAAGTATCGG GGAGTTAATG ATTTCCGGGC TAGGTCTGGC GATGGTCGCT CAATTGGTGC CACAGCGTCT GATGGGCTTC ATCATGGGTG CCTGGTTCCT GACGTCAGCC GGTGCCGCAA TTATTGCAGG CTACGTCGCC AACATGATGG CCGTGCCTGA GAACGTCGTA GATCCGCACA CCTCTCTTGA GATTTATAGC AATGTATTCA TGCAGATTGG CATAGTAACG GGCATCATCG CCGTTCTGAT GCTGTTGACC GCACCGAAAC TGACGCGCAT GACTCAGGAT GTCATCGACA CTCCTGTGAA TACCGCCGCT ACTAGCGCAG AATCGGTCTG A
|
Protein sequence | MSTANNNSES TESISMNAFK QPKAFYLIFS IELWERFGYY GLQGIMAVYL VKMLGMSETD SITLFSSFSA LVYGFVAIGG WLGDKVLGTK RVIVLGAIVL AFGYAMISYS GHSVTWVYIG MATIAVGNGL FKANPSALLS TCYAKDDPRL DGAFTMYYMA VNIGSFFSML ATPVLAANYG WSVAFSLSVV GMILTLVNFM FCRKWVSTQG SQPDFQPINL QKLAITLVGI VALVALSTWL LHNQSVARWI LTLISIAVVA IFIKEMLAVK GAERRKMIVA LLLMLEAVVF FVLYNQMPTS LNFFAIRNVE HSILGFAFEP EQYQALNPFW IMVASPILAA VYNKMGDQLP MAHKFAIGMV LCSGAFLVLP WGASMANEQG IVSVNWLILC YGLQSIGELM ISGLGLAMVA QLVPQRLMGF IMGAWFLTSA GAAIIAGYVA NMMAVPENVV DPHTSLEIYS NVFMQIGIVT GIIAVLMLLT APKLTRMTQD VIDTPVNTAA TSAESV
|
| |