| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2272 |
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| Symbol | |
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| ID | 8530672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 2461310 |
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| End bp | 2461789 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | |
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| Product | type VI secretion system effector, Hcp1 family |
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| Protein accession | YP_003259649 |
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| Protein GI | 261821543 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAGTT TGATCTATAT GAGTGTAACT GGTAGTAAAC AAGGATTGAT TTCATCAGGA
TGTTCGACGG TTGCGTCAAT AGGCAATAAA TATCAGGCAG CACACGAAGA CGAAATTTTT
ATCTATGAGC TTACCAGCCA TATTATGCGG GCTGAAAATG TGGTCTTTCA ACCTGTTGAA
ATCCGTAAAC CGGTAGATAA AGCAACGCCG TTATTTGCTC AGGCATTAGA CGATAATGAA
AAACTAGATT GCGAGTTTAA GTTTTACAGA ACTGCGCCAA CGGGGAACAA TGAACTCTAT
TTTTCACTAC GGCTAAGAAA TGCAATTATC ACCGATCTTC GTTTCTTTTT CCCAAACTCT
ATGACACATA ATGGGATGCA ACCACAAGAA AGTGTCTCCT TAAAATATGC AACCATAGAA
TGGGAACATG TTGCAGCACG AACCAGTTCG TGTCTCTTCT GGCAAGAATC CTCTTATTAA
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| Protein sequence | MASLIYMSVT GSKQGLISSG CSTVASIGNK YQAAHEDEIF IYELTSHIMR AENVVFQPVE
IRKPVDKATP LFAQALDDNE KLDCEFKFYR TAPTGNNELY FSLRLRNAII TDLRFFFPNS
MTHNGMQPQE SVSLKYATIE WEHVAARTSS CLFWQESSY
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