Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2250 |
Symbol | |
ID | 8530650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2437406 |
End bp | 2438743 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | PTS system ascorbate-specific transporter subunit IIC |
Protein accession | YP_003259627 |
Protein GI | 261821521 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.280391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACCG TTATCAATTT CATTGTGAAA GACTTATTAG GCCAGGCATC CATATTAATC GCGCTGATCG CCATGATTGG GTTGATTTTA CAGAAGAAAT CGGTAGGGAA AATTGCAGAG GGGACATTCA AGACACTGCT TGGTTTCCTC ATCATGATGG CAGGGATTAA CATCATCGTC GATGCTCTGA CGTATTTGAA CAGTATCTTT ACCCACGGTT TCGGCATGAA AGGCTACATC ACGGACGTCG CCGCCATCGC CGGATTGGCA AACCGCGAAC TTGGGTCAGA AGTCGCACTG ACGCTGATGG TGATCTTTGC CGTCAACATC CTGATTGCGC GGATTACCCC CTTTAAATAT ATCTTCCTGA CGGGGCAGGC TCTGCTGTGG ATGGCAACAA TCGGTACGGT GATCGGCTAT AAGTCGGGCT TGACCGGCGC GACGTTGATC CTCACCGGCG GTATATTTGG CGGTATTATG GCCGTGCTGA TGCCTGCGCT GGCGCAGCCG ATTGTCCGTA AAATCACAAA TTCCGATGAT GTTGCACTGG GGCATTTTTG TACCATCGGG TATTTGGTGC AGGCCGCCGT CGCTCGGTTA GTCGGTAAAA ACTCTAAATC TACAGAAGAT TTAACGCTGC CTGATAACTT CAAATTCTTG CAGGACACTT ACCTGTCGAT GGCCGTCGTT ATGGTGCCGA TGTACCTCAT CCCCGCCTTG GCTGCGGGGC CCGCCTACAT CGCGCAATAT GCCAACGGCG TCAACTATCT GATGTATTCC TTCATGCAGT CCATGCAGTT TGTGGCGGGC GTTTTCGTTC TCTACAGCGG TGTACGGCTG CTGCTTAATG AGCTGGTGCC TGCATTTCGA GGTATCGCCA TGCGTCTGGT GCCTAACGCT AAACCCGCGT TGGATTGCCC GGTACTCTTC CCCTATGCAC CCAACGCCGT GATTGTTGGC TTCCTCGCCA CCACCGTTGG TTCCATTCTG GGGATGCTGA TCTTCCCAAT GTTTGGATTG GCGATGATTT TGCCAGGTTT ATTGACCAAC TTCTTTGCAG GCGGAACGGC GGGTATTTTC GGTAACGCCA TGGGGGGACG GCGTGGCGCA ATTATCGGTG GTGTGGTTCA TGGCCTTTTT ATTACCTTAT TGCCTGCCAT TCTGGTGCCA TTACTGGAAG TCTTCGGATT TACCGGCGTG ACCTTCAGTG ACTCTGATGT CATTGGTACC GGGCTAATAT TAGGACACGC CTTCCAGCAA GACTGGTTAT TTGTCGCTGC CTTTATCGCG TTCGTGGCAG TCATTGCCTT TATTGCAAAT CGTAAACTGT CGCAATAA
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Protein sequence | MNTVINFIVK DLLGQASILI ALIAMIGLIL QKKSVGKIAE GTFKTLLGFL IMMAGINIIV DALTYLNSIF THGFGMKGYI TDVAAIAGLA NRELGSEVAL TLMVIFAVNI LIARITPFKY IFLTGQALLW MATIGTVIGY KSGLTGATLI LTGGIFGGIM AVLMPALAQP IVRKITNSDD VALGHFCTIG YLVQAAVARL VGKNSKSTED LTLPDNFKFL QDTYLSMAVV MVPMYLIPAL AAGPAYIAQY ANGVNYLMYS FMQSMQFVAG VFVLYSGVRL LLNELVPAFR GIAMRLVPNA KPALDCPVLF PYAPNAVIVG FLATTVGSIL GMLIFPMFGL AMILPGLLTN FFAGGTAGIF GNAMGGRRGA IIGGVVHGLF ITLLPAILVP LLEVFGFTGV TFSDSDVIGT GLILGHAFQQ DWLFVAAFIA FVAVIAFIAN RKLSQ
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