Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2202 |
Symbol | |
ID | 8530602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2394967 |
End bp | 2395728 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | 2-deoxy-D-gluconate 3-dehydrogenase |
Protein accession | YP_003259579 |
Protein GI | 261821473 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0773662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTAA ATTCTTTTGA TTTGCAAGGT AAAGTTGCTC TTATCACTGG TTGTGATACC GGTTTGGGTC AGGGTATGGC TATCGGTTTG GCGCAAGCCG GCTGTGATAT CGTCGGCGTC AACATCGTTG AACCAAAAGA CACCATCGAA AAAGTCACCG CACTGGGACG CCGTTTTCTC AGCCTGACCG CTGACATGAG CAATGTATCT GGTCATGCCG AACTGGTAGA AAAAGCCGTT GCTGAATTTG GCCACGTTGA CATTCTGGTC AACAACGCCG GTATCATTCG TCGTGAAGAT GCCATCGAGT TCAGCGAGAA AAACTGGGAC GACGTCATGA ACCTGAACAT TAAGAGCGTT TTCTTTATGT CTCAGACCGT TGCGCGCCAG TTCATCAAAC AAGGTAAAGG CGGCAAGATC ATCAACATCG CTTCTATGCT GTCCTTCCAG GGCGGTATCC GCGTGCCTTC TTACACTGCA TCAAAAAGCG CCGTTATGGG TGTAACCCGT CTGCTGGCTA ACGAGTGGGC AAAACACGGC ATCAACGTCA ACGCGATTGC TCCAGGGTAC ATGGCCACCA ACAATACTCA GCAACTGCGC GCTGATGAAG ATCGTAGCAA AGAAATTCTG GATCGTATCC CCGCTGGCCG TTGGGGTTTA CCACAGGACC TGATGGGCCC ATCCGTCTTC CTGGCATCCA GCGCATCTGA CTACATCAAT GGCTACACTA TTGCCGTTGA CGGTGGCTGG TTGGCTCGCT AA
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Protein sequence | MILNSFDLQG KVALITGCDT GLGQGMAIGL AQAGCDIVGV NIVEPKDTIE KVTALGRRFL SLTADMSNVS GHAELVEKAV AEFGHVDILV NNAGIIRRED AIEFSEKNWD DVMNLNIKSV FFMSQTVARQ FIKQGKGGKI INIASMLSFQ GGIRVPSYTA SKSAVMGVTR LLANEWAKHG INVNAIAPGY MATNNTQQLR ADEDRSKEIL DRIPAGRWGL PQDLMGPSVF LASSASDYIN GYTIAVDGGW LAR
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