Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2157 |
Symbol | |
ID | 8530557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 2347536 |
End bp | 2348789 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | isocitrate dehydrogenase |
Protein accession | YP_003259538 |
Protein GI | 261821432 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0640579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAGCA AAGTAGTTGT ACCGACAGAA GGTCAGAAAA TCACGGTTGA TGCTCAAGGC AAACTGGTTG TTCCGAATAA TCCAGTTATC CCGTTTATCG AAGGTGACGG CATTGGTATC GATGTAACGC CTGCTATGAT CAACGTAGTA GACGCCGCTG TGAAGAAAGC CTATCAGGGC AAGCGCGCGA TTTCCTGGAT GGAAATCTAT ACGGGTGAGA AATCCACGCA AGTTTACGGT AAAGATGTTT GGTTGCCGGA TGAAACACTG GATTTGATCC GTGAATACCG TGTGGCGATT AAGGGCCCGC TGACAACGCC AGTTGGTGGT GGTATTCGTT CTCTGAACGT TGCGCTGCGC CAACAGTTGG ATCTGTACGT TTGCCTGCGT CCGGTACGCT ACTACGAAGG TACACCTAGC CCGGTTAAAC AGCCTGAGCT GACTGACATG GTGATCTTCC GCGAAAACGC CGAAGACATT TATGCCGGTA TTGAGTGGAA AGCGGGTTCT GCTGAAGCAG ACAAAGTGAT CAAATTCCTG CGTGAAGAAA TGGGCGTTAG TAAAATCCGT TTCCCTGAGC AGTGTGGTAT CGGCGTCAAG CCGTGCTCTG AAGAAGGGAC CAAACGCCTG GTTCGCGCTG CGATCGAGTA CGCGATTACC AACGACCGTG ATTCCCTCAC GCTGGTGCAT AAAGGCAACA TCATGAAATT CACCGAAGGC GCGTTTAAAG ACTGGGGTTA CCAGTTGGCG CGTGAAGAAT TCGGCGGTGA ACTGATCGAT GGCGGTCCGT GGGTGAAGAT TAAGAACCCG AACACCGGCA AAGATATCGT GGTAAAAGAC GTGATCGCTG ACGCATTCCT GCAACAAATC CTGCTGCGCC CTGCTGAATA TGACGTGATC GCCTGTATGA ACCTGAACGG TGACTATATT TCTGATGCAC TGGCGGCACA GGTTGGCGGT ATCGGTATTG CTCCGGGTGC AAACATCGGT GACGAATGCG CACTGTTTGA AGCCACGCAC GGTACGGCAC CGAAATATGC TGGTCAGGAT AAAGTGAACC CAGGTTCCGT TATTCTGTCT GCTGAAATGA TGCTGCGTCA CCTGCAATGG TTCGAAGCGG CTGACCTGAT TGTTAAGGGC GTTGAAGGCG CGATCAAGAA CAAGACCGTG ACTTACGATT TCGAACGTCT GATGGAAGGC GCTACGCTGC GTAAATGTAG CGAGTTTGCG CAGGACATCA TCGATAACAT GTAA
|
Protein sequence | MESKVVVPTE GQKITVDAQG KLVVPNNPVI PFIEGDGIGI DVTPAMINVV DAAVKKAYQG KRAISWMEIY TGEKSTQVYG KDVWLPDETL DLIREYRVAI KGPLTTPVGG GIRSLNVALR QQLDLYVCLR PVRYYEGTPS PVKQPELTDM VIFRENAEDI YAGIEWKAGS AEADKVIKFL REEMGVSKIR FPEQCGIGVK PCSEEGTKRL VRAAIEYAIT NDRDSLTLVH KGNIMKFTEG AFKDWGYQLA REEFGGELID GGPWVKIKNP NTGKDIVVKD VIADAFLQQI LLRPAEYDVI ACMNLNGDYI SDALAAQVGG IGIAPGANIG DECALFEATH GTAPKYAGQD KVNPGSVILS AEMMLRHLQW FEAADLIVKG VEGAIKNKTV TYDFERLMEG ATLRKCSEFA QDIIDNM
|
| |