Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2136 |
Symbol | yebU |
ID | 8530536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2322608 |
End bp | 2324062 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | rRNA (cytosine-C(5)-)-methyltransferase RsmF |
Protein accession | YP_003259517 |
Protein GI | 261821411 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAAAAT TTACTCCAGC CAATCTGCCT GCTGAATTTC TCGACACTAT GCGAGACATT ATGCCTTCAT CACTTTCGAT GGAGGATTTC ATTGCCGCCT GCCAGCGTCC GCTGCGCCGG AGCATCCGCG TCAATACGTT AAAAATCAGC GTTGATGCCT TCCGACAGCT CGTACAACCT TATGGTTGGC AGCTTGAGCC GATCCCCTGG TGCCAGGAAG GTTTCTGGCT GCTGAATACA GAAGAGGAAA ACACGCGGCT CGGCAATACG CTGGAGCACC TGAGCGGGCT ATTCTACATT CAGGAAGCCA GCTCCATGCT GCCCGTCAGC GCTCTGTTCC ATCGTAATGA TGCGCTGGGA ACCATTTTAG ACGTCGCCGC TGCGCCGGGT TCCAAAACAA CGCAGATTGC GGCACGACTG AATAACGAAG GCGCTATCGT TGCCAACGAG TACTCAGCCA GCCGGGTAAA GGTACTGCAT GCCAATATCA GCCGCTGCGG CGTCAGCAAT ACTGCGATTA CCCACTTCGA TGGGCGCGTT TTCGGCGCGG CGCTGCCGGA ATATTTTGAT GCGATACTGC TAGATGCCCC GTGCTCAGGT GAAGGCGTGG TGCGTAAAGA TCCGGCGGCG ATGAGCCACT GGTCGCAAGA GAGCATTACC GACATTGCCG CTACGCAGCG CGATCTGATT CTGAGTGCGT TCCATGCCCT AAAGCCCGGC GGCGTGATGA TTTATTCCAC TTGTACGCTG AATCGGCAGG AAAATCAGCA GGTCTGTCAT TGGTTACAGG CGCAATTCCC TGATGCGTGT GAGTTTGAAT CACTAGACGA TCTCTTCGCT GACGCAGAAC TCGCCACAAC GGAAGAAGGC TTCTTGCACG TCTTCCCACA GATTTACGAC AGTGAAGGCT TCTTTGTTGC CCGTTTGCGT AAAACCGCCA GCGTGCCGCC ACTGCCGCGC CCGGGTTATA AAGTCGGTAA ATTTCCGTTC TCTCCGGTCG CACACAAAGA TCGTGTGTTA CTCACAGAGG CTGCACGTAA ACAGGGTATT CACTGGGATG AAGCGTTACT TCAGCTATGG CAGCGTGATA GCGAGATTTG GCTTTTCCCT GCGGCACTCG CCTCTGCTTT TGGCAATATC AAATTCTCAC GCATTGGCAT TAAGCTTGCC GAACGCTTCC CCAAAGGCTT TCGTTGGCAG CATGAAGCGG TTGTGGCACT GGCAGACCCG AACGCGAGCA ATGCCTACGC ACTGAACGAT CACATCGCCT GTGAGTGGTT TCAGGGCAAA GACAGCTACC CAGATCCGCT TCCTACTGCG GATGAATTGA TTTTAACTTA CCAGAACACG CCCGTTGGTC TGGCAAAGCG CATCAGCAGT CGGATAAAAA ACAGCCTACC ACGCGATTTA GTTCGGGATG GCGCATCCTC CGCACGGCCT CTTGCTAAAG AATAA
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Protein sequence | MAKFTPANLP AEFLDTMRDI MPSSLSMEDF IAACQRPLRR SIRVNTLKIS VDAFRQLVQP YGWQLEPIPW CQEGFWLLNT EEENTRLGNT LEHLSGLFYI QEASSMLPVS ALFHRNDALG TILDVAAAPG SKTTQIAARL NNEGAIVANE YSASRVKVLH ANISRCGVSN TAITHFDGRV FGAALPEYFD AILLDAPCSG EGVVRKDPAA MSHWSQESIT DIAATQRDLI LSAFHALKPG GVMIYSTCTL NRQENQQVCH WLQAQFPDAC EFESLDDLFA DAELATTEEG FLHVFPQIYD SEGFFVARLR KTASVPPLPR PGYKVGKFPF SPVAHKDRVL LTEAARKQGI HWDEALLQLW QRDSEIWLFP AALASAFGNI KFSRIGIKLA ERFPKGFRWQ HEAVVALADP NASNAYALND HIACEWFQGK DSYPDPLPTA DELILTYQNT PVGLAKRISS RIKNSLPRDL VRDGASSARP LAKE
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