| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2024 |
|---|
| Symbol | |
|---|
| ID | 8530423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 2204018 |
|---|
| End bp | 2204902 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | fumarylacetoacetate (FAA) hydrolase |
|---|
| Protein accession | YP_003259410 |
|---|
| Protein GI | 261821304 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTG CAAGTTATCG TTATAACGGT AAGGACAGTT ACGGCATTTA TACGGCAACG
GGGTTAATCG ATCTCGGTAG TAAAATTGGC CACCTTTACC CCGATTTGAA AACATTACTG
GCACAGAATG CGCTACCTGT TGCCGATGGG TTCAGTGCGA ATGCCTCGGA TATTCCGGTC
GCAGATGTGA CATTCCTACC CGTTATTACC ACACCAGGGA AAATACTGTG CGTAGGGATG
AACTATGCCG CTAAGCGACA GGAATTTAAT GAACTGAATC CTGCACCAAC ATTATTTGTA
CGTTTTGCGG ATTCACAAAC TGGACACGCG ACGCCCGTTA TCAAACCGCA TTATTCCTGC
GAATTTGATT ATGAAGGCGA ATTGGCGGTC ATTATCGGTA AAGGCGGACA ACATATTTCT
CGGGATGTCG CACTTTCTCA TGTTGCAGGA TATAGCTGTT ACATGGATGG CTCTGCACGT
GACTGGCAGC ATAGCTGGTT TACCGCGGGT AAGAATTGGC AGAAGACCGG CGCGTTTGGC
CCCTACTTGA CCACCTCGGA TGAAATACCC GATCCGCATG TGCTAGCAAT CCGCACGTAT
CTGAATGGCC GCATGGTGCA GGATGACAAT ACCAGCAGCA TGATCCACAA AGTTGCTGAA
CTGATTGAAT ACATCAGCAC CTTTACTGAA CTGAGTGCGG GCGATGTGAT CATCACCGGG
TCGCCGGGCG GCGTAGGTAA AAAACGTAAT CCACCGCTAT TTATGAACGC GGGTGACTGC
ATTGAAGTTG AAATCGAAAA CATTGGTCAT CTACGCAACA TGATAGTGGA TGCGGCGGTG
CCGGTGAAAT CGGTGCCGAC CACTGCTGAA GTCGCTGCGC ACTAA
|
|---|
| Protein sequence | MKLASYRYNG KDSYGIYTAT GLIDLGSKIG HLYPDLKTLL AQNALPVADG FSANASDIPV
ADVTFLPVIT TPGKILCVGM NYAAKRQEFN ELNPAPTLFV RFADSQTGHA TPVIKPHYSC
EFDYEGELAV IIGKGGQHIS RDVALSHVAG YSCYMDGSAR DWQHSWFTAG KNWQKTGAFG
PYLTTSDEIP DPHVLAIRTY LNGRMVQDDN TSSMIHKVAE LIEYISTFTE LSAGDVIITG
SPGGVGKKRN PPLFMNAGDC IEVEIENIGH LRNMIVDAAV PVKSVPTTAE VAAH
|
|---|
| |