Gene Pecwa_2019 details

Gene Information

• Locus tag: Pecwa_2019
• ID: 8530418
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 2197298
• End bp: 2199232
• Gene Length: 1935 bp
• Protein Length: 644 aa
• Translation table: 11
• GC content: 51%
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_003259405
• Protein GI: 261821299

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.858801
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCTTAG CCAAAAAAAT CAGAAATCTT AAAATATCCC AAAAGCTTTA TCTTGGGTTC 
GGGGTCATCC TGCTACTGGT CATCGTTGCA TCGTTACTTA GCGCGGGGCG CTTCAGGGAA 
ATTCGTGACA TCTATGAGAA AACCAACCTT ATTTACAACA TCAATATCGA GGTCTTTCAG 
GCAAAAATAA ACCGCCTGAA GTATTTTTAC TCCTATGATG AAAAGTCGCG TGAAACCATG 
GCGGGTTTTG TTAAACACGC ATCAGAATTA ACGACTGAAG CGAAAACACT TTCGTGGAGT 
CAGGAAGGGT TAACGCTCAT CAATGACCTC AGCCAGCACC TGACCGAATT CCAGAACGCT 
ATCACCGAGA TGGGGAAAGC CACGCTACGC GTGGTAGAAA ACCGCGACAA AATCAGCGCC 
GCCAACGGAC AAAACGTGAC GACTGACTTT TATGCCAGAC TACGCCAGCA GCCTTCTGAT 
AGCACGACGC AGTATCAGGC TGAAGATCTG GCAACGCAGG TTTCAGAACT GAAGCAGTTA 
TCCTATGAGT TGCAGCTTAA GCAAAATGCC GATGCTGCAA AGAATCTCGA TGAGTCTTTT 
AGCCGCTTTG ACAGCAACTA TCAGGCCGCC GCTGCAGTAC TAACGCCGGA ACAAAAGGTC 
ATCGTAGAGA GCCTGCAAAG CTATGTCACC CGCTATAAAA AACTCAATAA TGACTATTTC 
CAGAGCATCA ACGACCTGAA AAAAGCGGAA GACGGCGTGA AGGTTGGCGG AGATAAAAGC 
AGCGCCTCCA TTAAAGCGCT TATCACTATC GTCAAAGAGA AGAATGACGC ACTGGCATAC 
GGTTCCGCTA CCATCACGAT GATCATTGGC CTTATTGCGG TGGTCATCGG CATCATCATT 
TCACTGCTGA TTACCCGCCA AATCACCCGC CCCGTGATCC ATAATCTCTC GCTGGCGGAA 
AAAATCGCCG CGGGCGATCT GACCTCAACG ATCACCGTTG ACCGCGATGA TGAACTGGGC 
CAATTAACGG CGGCAATGGG GAGAATGAAT GAAAAGCTGC GCCATATGAT CAGCGATGTA 
CGGGACAGTG TGGATAGTGT TTCAACCTCG GCGGCCAAGA TTGCCGCCGG TAATAGCGAC 
CTCTCGTCCC GCACCGAGCA GCAGTCTGCT GCCGTAGTAG AAACTGCCGC CAGCATGGAA 
GAACTGACAT CGACCGTTAA AAACAACGCC GAGAACGCCA AACAGGCGAG CCAAATTAGT 
ACCGAAGCCT CACAAAATGC GCACAAAGGC GGTGAAGTGG TACGGGATGT GGTGGATACC 
ATGTCAGGCA TTTCAGACAG TTCACGGAAA ATTGCCGACA TTACCGCCGT TATCAACAGC 
ATCGCTTTCC AGACCAATAT TTTAGCGCTT AACGCCGCCG TAGAAGCCGC GCGAGCCGGG 
GAACAAGGTC GTGGGTTCGC CGTAGTTGCC AGCGAGGTAC GGACGCTTTC CCAACGCACG 
TCTCAAGCTG CGAAAGAGAT CGCCAGCCTG ATATCCGAAT CAGTATCACG TATCAATGTG 
GGAACGCAGT TGGTAGCCAA TGCGGGAACG GCGATGGATC AGATCGTCTC CTCCGTTTCA 
CGGGTTAACG ACATCATGGG AGAAATCGCC TCCGCCTCCG ATGAGCAAAG CCGTGGCATT 
GAGCAAATCT CCCGCGCCAT CAGCGAGCTT GATACCACTA CGCAGCAAAA TGCGGCGCTG 
GTGATGGAAT CATCAATCTC CGCTAACTCT CTGGAAGAGC AGTCTGCGAT ATTGGAAAGT 
ATGGTAGCTA ACTTCCGCCT GTCGGATAAC GAGGGGCGTA AGCCAAAAGC GGCTATTCAC 
GGTTTATCGC AGCAGCAGAA GCCCCTACTG CCTGCATCAA AACAATCGCA GGATTCCAGT 
TGGACAACGT TCTAA 

 

Protein sequence

MFLAKKIRNL KISQKLYLGF GVILLLVIVA SLLSAGRFRE IRDIYEKTNL IYNINIEVFQ 
AKINRLKYFY SYDEKSRETM AGFVKHASEL TTEAKTLSWS QEGLTLINDL SQHLTEFQNA 
ITEMGKATLR VVENRDKISA ANGQNVTTDF YARLRQQPSD STTQYQAEDL ATQVSELKQL 
SYELQLKQNA DAAKNLDESF SRFDSNYQAA AAVLTPEQKV IVESLQSYVT RYKKLNNDYF 
QSINDLKKAE DGVKVGGDKS SASIKALITI VKEKNDALAY GSATITMIIG LIAVVIGIII 
SLLITRQITR PVIHNLSLAE KIAAGDLTST ITVDRDDELG QLTAAMGRMN EKLRHMISDV 
RDSVDSVSTS AAKIAAGNSD LSSRTEQQSA AVVETAASME ELTSTVKNNA ENAKQASQIS 
TEASQNAHKG GEVVRDVVDT MSGISDSSRK IADITAVINS IAFQTNILAL NAAVEAARAG 
EQGRGFAVVA SEVRTLSQRT SQAAKEIASL ISESVSRINV GTQLVANAGT AMDQIVSSVS 
RVNDIMGEIA SASDEQSRGI EQISRAISEL DTTTQQNAAL VMESSISANS LEEQSAILES 
MVANFRLSDN EGRKPKAAIH GLSQQQKPLL PASKQSQDSS WTTF