| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2014 |
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| Symbol | |
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| ID | 8530413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 2191581 |
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| End bp | 2193842 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_003259400 |
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| Protein GI | 261821294 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.758033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAACC GGATATCCGT TAATACCACT GAAGGTGATG GACTTCGTTT CTGGAAACTG
GAAGGGCGGG AAGCCATATC CGAGCCTTTT GTCTGGACCC TGACGTTACT CAGTGAAAAC
ACCCAGATCA ACCGCAGTAA ACTGCTGAGC CAATCCGTCA CTATTACCAT ACCGACTCAA
AACGTAGTAG CGCCCCGTTA TCTTAACGGC AAAATAACCT CGGTTGGCGC AACTCCGATT
GAACATGGCG GAACTCGTTA TGCGGTTTAT ACACTAACTG TCGAATCCGA TCTCTGGCCC
ATGAAGCGCA ATCGCGACAT GCGGATTTTT CAGGGAAAAA CGGTGCCTGA AATTATTAAA
GAGATTATCA GTGAACACAA CGTTAATGTG GATGAGAGAC TGACGGAAAA CTATCGCATC
TGGGAATATT GTGTTCAGTA TCAGGAGAGC TCTCTTGATT TCATCAGCCG CTTAATGGAA
CAGGAAGGCA TAGCCTTTCA TTTCCTGCAC GATATTGATA GCCATACACT TGTACTGACT
GATTCAGGAA CAGAGTTACA ACCTTTCTCT GGTTATGAAA TTATTCCCTA TCATCAAACC
CCGTCAGGAG GAGTAACGGG TGAAGAGGGT ATCAGTCAGT GGTTCGTTCA GGATAATATT
ACGCCGGGAT TATACAGTCT GGATGACTAT GATTTCCGTA AACCTAATGC TTGGTTGTTT
CAGGCCCGGC AGAACAACGT GGCCCCTCAA CCAGGTACTG TGAGCGTCTA TGACTGGCCA
GGCCGTTACG TTGACCACAA CCATGGTGAT AGGTATGCCC GGATTCACCA AGAACGCTGG
CAGGTCGAAC ATCAGCAGAC ATCCGGAACA TCAAACGCCA GCGCAGTCGC GCCGGGACAT
ATATTCCGGC TTAAAAACGC CCCATTCCCC GATCATAACA GCAGCTATCT GATAACCAAT
GCGACTTATC AGTTTGAGGA AAACCCGTAT TCAACATCCG ACACCAGCAG CAGTACGCAA
AAGACGGATT TTACCGTTAT TCCAGCGGTT ACTCCTTACA GACCAGAACA GACAACACCA
TGGCCAAGAA CATACGGTCC ACAGACGGCA AAGGTAGTAG GGCCGACCGG AGAGAGTATT
TGGACAGACA ATTATGGTCG GGTAAAAGTG AAGTTTCACT GGGATCGACA GGCGAAAGGG
GATGATACCA GCTCATGCTG GATACGGGTT TCCAGCGCTT GGGCCGGACA GGGGTTTGGT
GGGGTGCAGA TTCCACGAAT CGGCGATGAA GTCGTGGTGG ATTTTATCAA CGGTGACCCT
GACAGACCGA TTATCACCGG ACGAGTCTAT AACAAATCCA GCATGCCACC ATGGGAACTC
CCTGCTGCTG CCACTGTGAT GGGCTTTATG ACCCGTTCAA AAGACGGTAA CAACGATAAC
GGTAGCCACC TGCTGTTTGA AGACAAAGCG GGTTCAGAAA AAATCGCTCT TCACGCTGAA
AAAGATATGA CTATTTCCGT GGAGAATAAT AAAACTGTTG AGATTGATGG CTCCCGCACG
ACCACAATAA AAGGCGAGCA GAAAGACGAT GTAACCAGTG CTGCCACGTT TCATTATCGG
GCTGCACACA CCACGACCGT GGAAGGAGAA GAGACCTCCG TTTTCAATAA CACCCAGACA
GAAACCATCA AAAATGGACG TAAACTGGAT ATTACCAGCG GTGGAGATAA CGTTACCATC
AAGGGAGAAA GGAATACGGA TATTGACGGA ACAGAAATTC ATCATGTTAC GGGAAAACTC
ACTGAAAATT ATGACAGTGG GCAGATAACG ACAATCAAAA AAGGAGGACG GAAGGATACT
ATTGATGGTG GAGTGACAAT TGATGTAAAT GGTGGGGACT GGATCCAGAA TATTGAAGGT
AAAACAGAAT TAAACTCTAA AGATGAGATG AATATAAACA GTAAAGCGAC AATTAAAATT
AAATCACCTA GTGTGATAAT TGATTCGCCA TCTGTGACCT ATACACACAA AAAAGAAAAA
AGTTATTGGG ACGATATTTC CAGTGTTAAA TTACTATCTG TGTCATTAAA AGGACTTGAT
ATTTCTATTA GTGATTTTTC CGCCGGACTT AAAGGCGTTA ACTACAGTAA AACTGCTTTT
GACATCTCAA CCAAAGACGG TCAGATAGAA TTTATAAACG CTATAAAGCT AACAAAGAGT
GCAGTGAAAT CTTACATTAA CGGATTGACG ACTTTTTTTT AA
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| Protein sequence | MANRISVNTT EGDGLRFWKL EGREAISEPF VWTLTLLSEN TQINRSKLLS QSVTITIPTQ
NVVAPRYLNG KITSVGATPI EHGGTRYAVY TLTVESDLWP MKRNRDMRIF QGKTVPEIIK
EIISEHNVNV DERLTENYRI WEYCVQYQES SLDFISRLME QEGIAFHFLH DIDSHTLVLT
DSGTELQPFS GYEIIPYHQT PSGGVTGEEG ISQWFVQDNI TPGLYSLDDY DFRKPNAWLF
QARQNNVAPQ PGTVSVYDWP GRYVDHNHGD RYARIHQERW QVEHQQTSGT SNASAVAPGH
IFRLKNAPFP DHNSSYLITN ATYQFEENPY STSDTSSSTQ KTDFTVIPAV TPYRPEQTTP
WPRTYGPQTA KVVGPTGESI WTDNYGRVKV KFHWDRQAKG DDTSSCWIRV SSAWAGQGFG
GVQIPRIGDE VVVDFINGDP DRPIITGRVY NKSSMPPWEL PAAATVMGFM TRSKDGNNDN
GSHLLFEDKA GSEKIALHAE KDMTISVENN KTVEIDGSRT TTIKGEQKDD VTSAATFHYR
AAHTTTVEGE ETSVFNNTQT ETIKNGRKLD ITSGGDNVTI KGERNTDIDG TEIHHVTGKL
TENYDSGQIT TIKKGGRKDT IDGGVTIDVN GGDWIQNIEG KTELNSKDEM NINSKATIKI
KSPSVIIDSP SVTYTHKKEK SYWDDISSVK LLSVSLKGLD ISISDFSAGL KGVNYSKTAF
DISTKDGQIE FINAIKLTKS AVKSYINGLT TFF
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