| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1963 |
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| Symbol | rumB |
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| ID | 8530362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 2130866 |
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| End bp | 2131993 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | 23S rRNA methyluridine methyltransferase |
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| Protein accession | YP_003259349 |
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| Protein GI | 261821243 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.333439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTGTG CCCGCTACAG CACGGGAACC TGTCGTTCCT GCCAATGGCT GGAAAAAGCC
TACCCACAGC AATTGTCTGA TAAGCAGCAG CACCTTGAAG GCTTGTTACA ATCACATGCC
GTACAGCGCT GGCTACCCGT GCAGCCTTCT GTGCAGTCTG CATTTCGTAA TAAAGCCAAA
ATGGTGGTGA GTGGTAGCGT GGAGCGCCCG CTGTTGGGGA TGTTACACCG TGATGGAACC
GCAGTGGATC TCTGTGATTG CCCGCTTTAT CCGTCCAGTT TCTTGCCTGC TTTCGACGTG
CTTAAAGCCT TCATTGCCCG TGCGGGGCTG ACGCCTTATA ACGTGGCGCG CCGCCGTGGA
GAACTGAAAT ACCTGCTGCT GACGGAAAGT ACGCAGCGCG GTACGTTCAT GCTACGCTTC
GTCTTGCGCT CGGAAACCAA GCTGGCACAA CTACGTGTCG CATTGCCCTG GCTACAGCAG
CAGTTACCCC AGCTTGAGGT GATATCCGTC AATATCCAGC CAGTGCATCA GGCGATTATG
GAAGGGAAAA CGGAGATTAT CCTGAGTGAC GCTGCCGCGC TGGCCGAACA GTTTAATCAG
GTGCCGCTAT ATATTCGTCC GCAAAGCTTT TTCCAGACGA ACCCGCAGGT AGCGGCTACT
CTGTATGCGA CGGCACGCGA CTGGGTCGCT GAGTTGAATA TTACCAGTAT GTGGGATCTG
TTTTGCGGAG TAGGGGGTTT TGGTCTGCAC TGTGCATCAC CCGAGATGCG TTTAACGGGC
ATTGAAATCA GCGCCGAGGC GATAGCCTGC GCTCGTCGCT CGGCGGAACA GTTAGGGTTG
AAACAGGTGG AATTTCAGGC GCTGGATTCC ACGCAGTTCG CGACGGCAAA ATCAGAGATC
CCCGACCTTG TGTTGGTTAA CCCGCCGCGC CGTGGTATCG GCAGTGAACT GTGCGCCTAC
CTGAGCCGGA TGGCACCGGA CTACATTCTC TATTCCAGTT GTAACGCGGA AAGCATGGCA
AAAGACATGA CGGAACTGGC GAATTACCGC GCGTTGCGCG TACAGTTGTT CGATATGTTC
CCGCACACGG CGCACTATGA AGTGCTGACG TTACTGAAGC GTGCTTGA
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| Protein sequence | MHCARYSTGT CRSCQWLEKA YPQQLSDKQQ HLEGLLQSHA VQRWLPVQPS VQSAFRNKAK
MVVSGSVERP LLGMLHRDGT AVDLCDCPLY PSSFLPAFDV LKAFIARAGL TPYNVARRRG
ELKYLLLTES TQRGTFMLRF VLRSETKLAQ LRVALPWLQQ QLPQLEVISV NIQPVHQAIM
EGKTEIILSD AAALAEQFNQ VPLYIRPQSF FQTNPQVAAT LYATARDWVA ELNITSMWDL
FCGVGGFGLH CASPEMRLTG IEISAEAIAC ARRSAEQLGL KQVEFQALDS TQFATAKSEI
PDLVLVNPPR RGIGSELCAY LSRMAPDYIL YSSCNAESMA KDMTELANYR ALRVQLFDMF
PHTAHYEVLT LLKRA
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