Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1924 |
Symbol | |
ID | 8530323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 2085607 |
End bp | 2086740 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein |
Protein accession | YP_003259311 |
Protein GI | 261821205 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.140611 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTCCAGT TGTCACAGCA AGATATTCAT TTGGGCGCAG CGGCCAGTAA CAAGCAGGAA GCTATCCAGC TTGTTGCTTC AGCATTGACC GATGCCGGGT GCGTTAACGC AGGGTATGTC GACGGCATGC TACAGCGTGA ACAGCAAACC TCTACCTATC TGGGAAGCGG CATTGCTATC CCTCACGGCA CAACCGATAC CCGCGATCTG GTATTGAAGA CCGGGGTTCA AGTATTTCAG TTTCCTCAGG GTATCGTCTG GGGTGAAGAT CAAACCGCCT ATGTCGTGTT AGGTATTGCT GCCCGCTCTG ACGAGCACTT GGCCTTGCTG CGTCAGTTGA CTCACGTTTT GAGCGACGAT CGCGTAGCGG CACGTCTGGC AAGCACCACC TCAGCGGAAG AACTGCGTAG TCTGCTGATG GGCGAGCAGC AGTTGGCGGA GTTCCGTTTT GACACCTCGC TGATTGCGCT GGATGTGGCG ACCGATAATC TGTTGACGCT CCAGGCGCTG AACGCCGGTC GCCTTCAGCA GGTTGGTGCA GCAGACGCCA GTTTTGTCAG CACTACCGTC AGCAATAAAC CGCTGAATCT GGGGCAAGGC GTGTGGTTCA GCGATAGTGC TGTTGGTAAC CTCAGCAGTG CGGCCGCGGT GGCGCGTCCG GCCGCGCCTT TCAGCGTTGA TGGTGAAAAT GTGGCCCTGT TGGTAACGGT TGCGGCGGCT GACGATCAGG CTTTTGCATC GATTGACTAC CTGAGCAACT TGCTGATTGC GCAAAAAGCG GAACGTCTGC TGACGGCGGA TGCGCCGACG CTGCTGGCAC TGTTGACCAG CGACGTACCG GAAGAGAGCG AAGTGCTGAC GGCAGAATTT ACTATCCGTA ACGAACACGG CCTGCACGCT CGTCCGGGCA CCATGCTGGT GAACGTGATC AAACAGTTCA CCAGTGAGAT TACGGTGACC AATCTGGATG GCACAGGCAA ACCGGCAAAC GGTCGCAGCC TGATGAAAGT GGTCGCGCTG GGCGTGAAAA AAGGTCACAA ACTGCGTTTC ACCGCCAGCG GTAGTGATGC AGAACAAGCG TTGGCCGCGA TTGGTGAGGC GATTACGTCC GGTTTGGGCG AGGGGGCAGC ATGA
|
Protein sequence | MFQLSQQDIH LGAAASNKQE AIQLVASALT DAGCVNAGYV DGMLQREQQT STYLGSGIAI PHGTTDTRDL VLKTGVQVFQ FPQGIVWGED QTAYVVLGIA ARSDEHLALL RQLTHVLSDD RVAARLASTT SAEELRSLLM GEQQLAEFRF DTSLIALDVA TDNLLTLQAL NAGRLQQVGA ADASFVSTTV SNKPLNLGQG VWFSDSAVGN LSSAAAVARP AAPFSVDGEN VALLVTVAAA DDQAFASIDY LSNLLIAQKA ERLLTADAPT LLALLTSDVP EESEVLTAEF TIRNEHGLHA RPGTMLVNVI KQFTSEITVT NLDGTGKPAN GRSLMKVVAL GVKKGHKLRF TASGSDAEQA LAAIGEAITS GLGEGAA
|
| |