| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1840 |
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| Symbol | |
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| ID | 8530238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 2002717 |
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| End bp | 2003964 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003259229 |
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| Protein GI | 261821123 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATGGCGC GCAAAAAAAC CATTGAAAAC GATCTGATTC TGGATGCCGC GGAAAAGGTG
CTGCTGCGTG ATGGCGTGCA TCGCTTCACG TTAGATGCCG TCGCGGCGGA AGCTAGTATT
AGCAAAGGTG GGCTGGTTTA CAGCTTTCCC AGCAAAGATC GGTTGATCAT GACTATGCTG
TCACGTGAAC TTGCCCGTTT TGAGCAGGAT GCACAACAGC AAACCGCACG CTACATCGAT
CAACCTCATG CCGATGTATT GGGTTACATT ACTGCGATAG CCCAGGAAGA AGAAGAGACG
ACATCGCGCG CCGTTGGCCT GCTCACCGCG CTGGTTCATT CCCCTTCGAT GTTAGAGCCC
GTGCGGGCAT TTTATCGCAC CAGATTGGAC AAGCTACGTG ACGCTACGCC AGCCATGCGG
CGTATCCGCC TGGCTTTTCT CGCGGCAGAA GGCGTTTTCC TGTTACAAGG GCTGGGCTTC
GTGACGCTAG ATCGTGAGGA ACGGCAAACG ATGCTCGATG ATGCCAAATC CTTATTCCAG
CCGGACGATG CTAAACATAC GGTTATTGCA CACACCATTT CAGCTCCTCT GGCTAGTCAG
CCAGCTTTTC CCCCACGAGA AACGTCCATC GTTCTTGCTG GCGAAACGAC ATCCGAACAG
GCGATCGCCT GGCTGGCAGA AAAAGGCGTC ACGCCGAGCG GAACCGGATT GGAAGCGGCA
CACCCACGCG CTGCTCACAT TATTAAAGCT GCCACGAATC TCATCAAGCA TGACGGTATT
CGCGCCCTAA CACACCGCGC CGTCGCGCAT GACGCCCACA TACCGTTAGG GTCAACGACC
TACCATTTTA CTAGTCTGGA TGACATGCTG AATGCCGTTA TGATTAGCGC AATTGCGCTA
TTTCGTGACG ACATGTTTAG CTGGTTTTAC ACACGCCGCC ATGACGACCC ATGCGATGTC
CTGGCCGATT TTGTCATGCG AGGCATAGAA GATATTGATG AGCTGGCACG CGAGTACGAA
CTCTTTACCG CCGCCATTTC ACGCCCTTCC CTACGCCCTA TCGCGCTTGA GTGGTCCAAC
ACTGTTGTCG CTATCATCAA AGTGGTCGCT CCAGATAACG CCGCACTCCC GCTAGGTACG
CTGTTGAACG GTTTTTTCAT CCGCGCGCTA CTGGAGAAAC ATGAGCGAAC TCTACCGCGC
GATCTGGTCT ATCAGGCTGT TTCCGCGTTG TATCACGCCT TTCGCTAA
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| Protein sequence | MMARKKTIEN DLILDAAEKV LLRDGVHRFT LDAVAAEASI SKGGLVYSFP SKDRLIMTML
SRELARFEQD AQQQTARYID QPHADVLGYI TAIAQEEEET TSRAVGLLTA LVHSPSMLEP
VRAFYRTRLD KLRDATPAMR RIRLAFLAAE GVFLLQGLGF VTLDREERQT MLDDAKSLFQ
PDDAKHTVIA HTISAPLASQ PAFPPRETSI VLAGETTSEQ AIAWLAEKGV TPSGTGLEAA
HPRAAHIIKA ATNLIKHDGI RALTHRAVAH DAHIPLGSTT YHFTSLDDML NAVMISAIAL
FRDDMFSWFY TRRHDDPCDV LADFVMRGIE DIDELAREYE LFTAAISRPS LRPIALEWSN
TVVAIIKVVA PDNAALPLGT LLNGFFIRAL LEKHERTLPR DLVYQAVSAL YHAFR
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