Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1836 |
Symbol | |
ID | 8530234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 1997414 |
End bp | 1998151 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003259225 |
Protein GI | 261821119 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.28867 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGTAT TTTGCTCTGA TAATGAAATT ATCAATAACA CGATAAAAAC CTATCTCAGC CGAAAGTTAA AACAGTATGG CGATCTGAAA TACGCCTACA TGATCATGAA CAAGAAAAAC CCATCCCAGG TTGTGATCAT TTCAAATTAC CCACAAGAAT GGGTTAATAC GTATAAAGAA AATAACTATC AGCATATCGA CCCCGTTATT TTAACGGCGA TCAATAAAGT CTCGCCGTTC TCTTGGGAAG ATAATATTGT TATTAATTCC AAACTGAAAT TCTCCAAGAT TTTTAATCTG TCAAAAGAAT ACGATATTGT TAATGGTTAT ACTTTTGTCT TGCATGACAA CAATAACAAT CTGGCTGCGT TATCGATTAT GTTTGAAGAA AACGCGCTAA CGGATATGGA AAATATTGTT GAAAAAAACA AAGACAAATT ACAAATGCTG CTTATTGTCA TTCATGAAAA AATAACCACT CTTTACAAAG AGATAACGCA AACCCCGCAG AGCAAAAAGC AAAGCGATAA AGAGATATTT TCCCAGCGTG AAAACGAAAT TCTCTACTGG GCCAGTATGG GGAAAACCTA TCCAGAAATT GCGCTAATTT TGGATATAAA GATTAGCACC GTGAAATTTC ATATCGGTAA TGTGGTAAAA AAACTCGGTG TTCTCAATGC CAAACATGCC ATCAGACTAG GCGTGGAATT ACAGCTCATC AAGCCAGAAC CACTATAG
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Protein sequence | MSVFCSDNEI INNTIKTYLS RKLKQYGDLK YAYMIMNKKN PSQVVIISNY PQEWVNTYKE NNYQHIDPVI LTAINKVSPF SWEDNIVINS KLKFSKIFNL SKEYDIVNGY TFVLHDNNNN LAALSIMFEE NALTDMENIV EKNKDKLQML LIVIHEKITT LYKEITQTPQ SKKQSDKEIF SQRENEILYW ASMGKTYPEI ALILDIKIST VKFHIGNVVK KLGVLNAKHA IRLGVELQLI KPEPL
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