Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1800 |
Symbol | |
ID | 8530198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 1954915 |
End bp | 1955688 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003259193 |
Protein GI | 261821087 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAAAGAA CGTCTTATGT GTTATTGAGC ATCACCTCTG TGGCGGTGGT GCTCGCATTA TGGCAGTGGG CGGGGGCGCA GCAGTGGGTG GATCCGCTGT TGCTACCGCC GCTGTCGGAT ATTCTCCTGA CTGCGGGGGA ATTAGCGCAA GATGGCTATC GGCAGGTGTC GCTATGGGAA CACATTGCCG TCAGTGTTGC TCGAGCGCTG AGCGCCTTCA GCGTCGCCAT TATTCTTGGT GTCCCGCTAG GCCTGTTGAT GGGGCTATCG CCTCCGATCG CTGCCGTGTT TAATCCTTTC GTTCAGTTTC TGCGACCGTT ACCTAAAATT GCACTGATCC CGCTGGCGGT AGTCTGGTTG GGAATTGGCG AAGCATCCAA ATTCTTTCTG ATCTTTATCG CGACTTTTCT CAGCGTTGTG GTCGGTGCCT GTGCCGCCGT GGATCGCGTG GAACGTTCCC GTATCCGCGT CGCGCAAACG CTCGGCGCAA GCCCTCGCCA GATCTTTCTC CACGTGGTGT TGCCCGATAC GCTACCGGAG CTGTTCACTA CGGTGCGGCT GGCTATCGGT GTTGGTTGGA CGTCGCTGAT TGCGGCTGAA ATGGTCGCTG CTACCTCGGG TATTGGCTGG ATGGTGATGA ATGCCAGTGC TTATCTGCGT ACCGATATTG TCATGTTGGG CATCTTACTA TTGGGGGGGA TTGGCTATGT GCTCGATCTG CTACTGGTCG GTGCGCAGCG CATCTTTGTG CCGTGGGCGG GGAAATCATC ATGA
|
Protein sequence | MKRTSYVLLS ITSVAVVLAL WQWAGAQQWV DPLLLPPLSD ILLTAGELAQ DGYRQVSLWE HIAVSVARAL SAFSVAIILG VPLGLLMGLS PPIAAVFNPF VQFLRPLPKI ALIPLAVVWL GIGEASKFFL IFIATFLSVV VGACAAVDRV ERSRIRVAQT LGASPRQIFL HVVLPDTLPE LFTTVRLAIG VGWTSLIAAE MVAATSGIGW MVMNASAYLR TDIVMLGILL LGGIGYVLDL LLVGAQRIFV PWAGKSS
|
| |