Gene Pecwa_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_1716 
Symbol 
ID8530113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand+ 
Start bp1866997 
End bp1867653 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content47% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003259110 
Protein GI261821004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.514564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAT TAAAGTTAGC CGCTTTATTA CCTGGGTTTT TAGCACTCAA TAACTCAGTA 
TGGGCCAGTG ATACTGCGAT GAATATTGAA GAGTTTGGCT ACTCTCCGTT AAATGATCAC 
GATCTTGTGC TTGCACCACT CAATACCGAA GTGCCTTTTT ATATTGCCGG TCACCGAAGC 
CACAGTTCTC ATCGTAGCCA CAGTTCGCAC AGCTCTCACC GTTCTTCATC AGGTGGTGGA 
TATTACGGGG GGAGTGCTAC GCCATACTAC CCCCGCAGCA GTGATTCATC TTCCGGGAGT 
AGCAGCTCAG GAGTGACGTC ATCACCGTCT TCGCCAGCAG CATCTTCACC TTCGACGAGA 
GCACTACGTT CAGATAGTGG GAACTCTGTA AGCTCTTCGA GATCGGGAAC GAACCAAAAT 
ACCAATTCCT CCATGAATGG TGTCTCTTCC GATCAGGAAA AGAGACGCAG GCTTATCATG 
CGTGTGCAAT TTGCCTTGTT TGATAAAGGC TATTATGAGG GCATCATTGA TGGCGTTATG 
GGACCAGGAA CCCGCTCTGC TATAAGGACA TATCGGATTA ATAAAGGTCT TCCTTTACCA 
GCGACTGAAA CGTTAGATAC CCAGCTACTG AATTCATTGA ATGTGCTTGC ACGATAA
 
Protein sequence
MKRLKLAALL PGFLALNNSV WASDTAMNIE EFGYSPLNDH DLVLAPLNTE VPFYIAGHRS 
HSSHRSHSSH SSHRSSSGGG YYGGSATPYY PRSSDSSSGS SSSGVTSSPS SPAASSPSTR 
ALRSDSGNSV SSSRSGTNQN TNSSMNGVSS DQEKRRRLIM RVQFALFDKG YYEGIIDGVM 
GPGTRSAIRT YRINKGLPLP ATETLDTQLL NSLNVLAR