| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1697 |
|---|
| Symbol | |
|---|
| ID | 8530094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 1849485 |
|---|
| End bp | 1850690 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_003259091 |
|---|
| Protein GI | 261820985 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGATACA AGATAAAAAA ATTCATTACG AGTGGTGGAG AGCGAGGATA TCTAATCCTT
GATAAAAACA CTGAACTGCC AGTTTACTAT CAAAATCTTT TTCTTACTAC AAATGTCAGG
AATAAAAGTG CAACCGCTTC AACGATAGAG ATAGTTGCAA CTAATCTGCT GATTTTCAGT
AGGTTCTTAG ATAGCAGAAA AATAAATATA GTAGAAAGAA TTGAGAATAA AGAATATCTT
AGTCTTGCTG AAATAGATGG TCTTATAAGA TATGCAAATC AAAGGTTCGA CAAACAGAAA
ATAATAAATA TAAAATTGAT GAATAACACG TTTATTGCTA AGAGAACTTT TAGTTATAGG
ATACATGTTT TTTCACGTTA TCTTAATTGG TTATGCGGAT TAGTTCATTC GGCAAAGGGG
ATTAATGCAA AGTATGAAGT AGATTCATTT ATTGACAGTA TCAAAGCACA TATACCAAAA
CACAGTTCAT TGAATATGAA TGAAAGATCT GAAAAATCTT TAAATGAGGA AGAGATCAAA
ATACTTTTCC ATCTATTGGA AATTGGCGGG ATTGAAAATC CTTTTCATAA GGAAGTTCAG
GTAAGGAATA GACTGATATT CACCTTGCTG TTGAGTTTAG GTTTAAGGGC TGGAGAGTTG
CTCAATCTCA AAGTAGATGA TTTTGATCTC AGAGACAACA CGCTGAGCAT TATTAGAAGA
CATGACTCAA AGGAGGACAG AAGATCTTAT CAGCCATTAG TTAAGACAGG TGAGAGAGTT
ATTCCATTAT CTGATGAGTT AGCTAATGAA GTTCTTGACT ATATAATCAA TAGTAGGGAA
AAGATGACTA AGAGAAAAAA ACATAGTTTC TTATTAGTTA CGCACTGCAC CGGAAAAACT
GCTGGAGAAC CTTTAAGTAT TTCAGCTTAT GAGAAAATCA TATCAACCTT GAAGAGAGCA
AGTCCAAAAT TATCCAGTCT ATCAGGTCAT AGATTAAGGC ACTCTTGGAA TTATGTTTAT
TCAAAAGAAA TTGAAGGGTC TCAATTGGAA TATAGCAAAA GGAAAGACTT AAGAAATTAT
CTTATGGGTT GGTCGAAAGA ATCAAAAATG TCTGAGAATT ATAATTTCAA ATACATAGTG
CAAAAAGAAA AAGATGCCGT CTTAAGAGTT TATGATTCAG TTAACAAAAT AATTAATGAG
GCATAG
|
|---|
| Protein sequence | MGYKIKKFIT SGGERGYLIL DKNTELPVYY QNLFLTTNVR NKSATASTIE IVATNLLIFS
RFLDSRKINI VERIENKEYL SLAEIDGLIR YANQRFDKQK IINIKLMNNT FIAKRTFSYR
IHVFSRYLNW LCGLVHSAKG INAKYEVDSF IDSIKAHIPK HSSLNMNERS EKSLNEEEIK
ILFHLLEIGG IENPFHKEVQ VRNRLIFTLL LSLGLRAGEL LNLKVDDFDL RDNTLSIIRR
HDSKEDRRSY QPLVKTGERV IPLSDELANE VLDYIINSRE KMTKRKKHSF LLVTHCTGKT
AGEPLSISAY EKIISTLKRA SPKLSSLSGH RLRHSWNYVY SKEIEGSQLE YSKRKDLRNY
LMGWSKESKM SENYNFKYIV QKEKDAVLRV YDSVNKIINE A
|
|---|
| |