| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1663 |
|---|
| Symbol | |
|---|
| ID | 8530058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 1802127 |
|---|
| End bp | 1802690 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003259060 |
|---|
| Protein GI | 261820954 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00975358 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGTC CACACCCTCT CAATCAGGCT GTCATCGCAC AGGCACTGCA TGATCTGCGC
AATGGCCAAT TGCGCAGAGC CAAGTCCATG GGATTTGATG ACACCGACCT TGACGCACTG
AAACATCCTG CCATGGCAAG CGTACTGGCC AACGCTAACG TGTCCTGGTG CTCCGTCGTG
GTCAACCGAG ATGTGCTGCG TCGCCTCCTG CATCAGGTCG ACGATGTAAC CGAGGAAGTC
GCCAGAATCG ACCGGCTTCT GCGCCTGGGT GCCAGTACCG AACTGATCAG CAAGTTCTTC
GGGCTCACCC ATCAGGAAAT CGCGTTGCGC CGCAGCGTGA TCGGATTGCC AAAAAGGAAA
GGTCGCCATC CGGTTCTGAC CGAAGAGCAG GATACCAATC TTTGGCACCG CTGGTCTGCT
GCAGTCAAGT CACAAAAAGT GGCACTCAAT GACGATATGG CTATGCTGGA TATCGCAGCG
GAGCTTGCCG AAGCCACGGA TCTGCCGCTG TCCGTTATCT GGAGTGCCAT ACGCGGATGG
ATTGATGAAG GGCAGACCAG ATGA
|
|---|
| Protein sequence | MTGPHPLNQA VIAQALHDLR NGQLRRAKSM GFDDTDLDAL KHPAMASVLA NANVSWCSVV
VNRDVLRRLL HQVDDVTEEV ARIDRLLRLG ASTELISKFF GLTHQEIALR RSVIGLPKRK
GRHPVLTEEQ DTNLWHRWSA AVKSQKVALN DDMAMLDIAA ELAEATDLPL SVIWSAIRGW
IDEGQTR
|
|---|
| |